Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 PPP1R2P5-201ENST00000457256 603 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 RBM43P1-201ENST00000476891 1081 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 MRPL42P6-201ENST00000486397 371 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC093281.2-201ENST00000510153 597 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC107393.1-201ENST00000512403 346 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 OR4V1P-201ENST00000525394 1140 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 MTND2P26-201ENST00000528255 1029 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC109635.4-202ENST00000531666 412 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 DNAJC8P1-201ENST00000554535 372 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC009097.3-201ENST00000563557 1018 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AL138976.2-201ENST00000563989 694 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC079089.3-201ENST00000603094 673 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 MIR7973-1-201ENST00000614683 76 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AL162233.1-201ENST00000620014 944 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AP003122.6-201ENST00000623831 495 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AP003072.5-201ENST00000623872 773 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 AC015726.3-201ENST00000624501 418 ntBASIC1.61□□□□□ -2.15
TRAV1-2A0A0B4J238 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 RNU6-1180P-201ENST00000364935 107 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 RNU6-234P-201ENST00000365229 104 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 RNU1-52P-201ENST00000384190 164 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 HNRNPDP2-201ENST00000406475 478 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 RNU2-2P-201ENST00000410396 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC096664.2-201ENST00000411843 406 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 HMGN2P30-201ENST00000423237 256 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 XKRY2-201ENST00000442362 1093 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 RPS24P6-201ENST00000452670 400 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AP002345.1-201ENST00000456493 928 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC010301.1-201ENST00000473936 355 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 RNA5SP468-201ENST00000516782 93 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AP001317.1-201ENST00000531194 960 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 NBEAP1-201ENST00000554452 979 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AMZ2P1-203ENST00000565833 850 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AP004372.1-201ENST00000604842 844 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AP004247.3-201ENST00000608682 624 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AL161734.1-201ENST00000609720 557 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AL590282.1-201ENST00000610379 1136 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.15-201ENST00000611544 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AL359535.1-201ENST00000612100 1087 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.16-201ENST00000613119 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.12-201ENST00000613778 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.20-201ENST00000613956 192 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.9-201ENST00000615427 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.11-201ENST00000616345 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.2-201ENST00000616535 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.3-201ENST00000617785 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.19-201ENST00000618602 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 RNU2-1-201ENST00000618664 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.6-201ENST00000619225 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.5-201ENST00000619465 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 U2.10-201ENST00000620268 191 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 OR1S1-201ENST00000624470 978 ntBASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV1-2A0A0B4J238 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 MIR491-201ENST00000384877 84 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 RNU4-65P-201ENST00000410473 140 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 RPL26P37-201ENST00000411983 438 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AL357078.2-201ENST00000416486 427 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AC234782.4-201ENST00000417646 1048 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 PTP4A1P3-201ENST00000433661 420 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms