Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 RPS29P12-201ENST00000460178 152 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AC083906.5-201ENST00000503722 328 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 MLLT10P2-201ENST00000506434 249 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 RNA5SP402-201ENST00000517148 110 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 IGJP1-201ENST00000522682 475 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AC090666.1-201ENST00000578241 445 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AL450270.1-201ENST00000606160 391 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 RMST_10.1-201ENST00000616309 154 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AC000403.1-201ENST00000613696 3585 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 GNG5P1-201ENST00000255500 204 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 OR5H2-201ENST00000355273 945 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 RNA5SP393-201ENST00000363423 117 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 RNU6-799P-201ENST00000363567 107 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 RNU6-730P-201ENST00000383954 104 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 RNU6-1074P-201ENST00000383995 104 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AL158825.1-201ENST00000414735 521 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AC009237.2-201ENST00000421358 284 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AC233981.1-201ENST00000423224 461 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 MTCYBP34-201ENST00000439552 670 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 HSFY3P-201ENST00000444242 1191 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AL929288.2-201ENST00000446368 407 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AP002404.1-201ENST00000532005 451 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 H3F3AP1-201ENST00000559984 334 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 MIR4325-201ENST00000583049 90 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 MIR5092-201ENST00000583139 88 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AC011471.1-201ENST00000585766 187 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 RPL23AP78-201ENST00000599928 470 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AC024153.1-201ENST00000603103 365 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 ZNF833P-201ENST00000424938 1494 ntBASIC2.63□□□□□ -1.99
USH1CQ9Y6N9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 MIR128-1-201ENST00000384921 82 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 FAT1P1-201ENST00000406588 507 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AL009174.1-201ENST00000426577 416 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AL645638.1-201ENST00000440519 361 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AL691517.1-201ENST00000440833 1235 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC005002.1-201ENST00000447458 540 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 CACYBPP2-201ENST00000453625 678 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AL031183.1-201ENST00000457667 207 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AP001992.1-205ENST00000462248 379 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 RPL30P14-201ENST00000482744 348 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 RNU6-416P-201ENST00000516265 103 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AP001804.3-201ENST00000525146 880 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 LSM6P2-201ENST00000552208 177 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 MIR4635-201ENST00000583759 79 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC006539.2-201ENST00000601729 572 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 RPL12P50-201ENST00000603116 116 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AL049779.4-201ENST00000604500 156 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AP004247.3-201ENST00000608682 624 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC009570.1-201ENST00000609599 745 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 MIR6076-201ENST00000617521 113 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC040168.1-201ENST00000623594 991 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 AC130650.2-201ENST00000618736 2403 ntBASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH1CQ9Y6N9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 MIR1289-1-201ENST00000408836 144 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 OR4K6P-201ENST00000416478 897 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC073901.1-201ENST00000462471 408 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms