Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PPBPP1-201ENST00000510807 373 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC008958.1-201ENST00000511047 682 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 MRPL49P2-201ENST00000521066 465 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AGGF1P4-201ENST00000568249 801 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 MIR3921-201ENST00000577308 85 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AF038458.1-201ENST00000588406 262 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC073648.5-201ENST00000603502 305 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC015871.2-201ENST00000603605 948 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC020910.2-201ENST00000603635 610 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AL451064.1-201ENST00000607718 471 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC008498.1-201ENST00000613012 531 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC007546.1-201ENST00000619452 559 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC095031.1-201ENST00000623685 672 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC116667.1-201ENST00000604855 2072 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 MIR383-201ENST00000362257 73 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 RNU5A-1-201ENST00000362698 116 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 RNA5SP28-201ENST00000363841 119 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 SNORD66.1-201ENST00000391230 76 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 TXNP7-201ENST00000406296 293 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 RPL21P24-201ENST00000413752 448 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC005094.1-201ENST00000440420 368 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 CDC42P4-201ENST00000510507 563 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 SNORA31.9-201ENST00000516429 84 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 SNORA31.22-201ENST00000517204 135 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC100870.1-201ENST00000522035 505 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC008489.1-201ENST00000524271 483 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AP003730.1-201ENST00000524605 285 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AP003392.2-201ENST00000527269 208 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC006064.5-201ENST00000541782 248 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 RPL23AP84-201ENST00000571193 464 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 RN7SL176P-201ENST00000580352 264 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC068790.2-201ENST00000602601 557 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC091805.2-201ENST00000603848 235 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 AC012557.2-201ENST00000605919 418 ntBASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.78□□□□□ -1.64
COL4A3BPQ9Y5P4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
COL4A3BPQ9Y5P4 AC018529.3-201ENST00000624212 2254 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AL133383.2-201ENST00000622958 2336 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC007685.1-201ENST00000329806 452 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 RNY1P12-201ENST00000364251 105 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 RPL7P60-201ENST00000397636 735 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 RNA5SP107-201ENST00000411358 122 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AL157831.1-201ENST00000426134 473 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 RPL7L1P10-201ENST00000427790 463 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC004975.1-201ENST00000428733 208 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 NUTF2P7-201ENST00000453086 375 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AL359273.1-201ENST00000510918 627 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC105914.1-201ENST00000511798 226 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 GMPSP1-201ENST00000514075 579 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 RNA5SP49-201ENST00000516450 115 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 Vault.3-201ENST00000516676 95 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU6-64P-201ENST00000517119 105 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 TOMM20P2-201ENST00000540082 421 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AL109766.1-201ENST00000555080 552 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 OR4H12P-201ENST00000556269 907 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 RPL23AP87-202ENST00000573039 466 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC105224.1-201ENST00000587055 421 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC245014.2-201ENST00000603689 287 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC246785.4-201ENST00000605374 287 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 SNHG22-203ENST00000617833 660 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms