Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC008121.2-201ENST00000614647 523 ntBASIC3.07□□□□□ -1.92
FOXA2Q9Y261 AC009464.1-201ENST00000615731 469 ntBASIC3.07□□□□□ -1.92
FOXA2Q9Y261 AL603758.1-201ENST00000618654 241 ntBASIC3.07□□□□□ -1.92
FOXA2Q9Y261 AC027309.3-201ENST00000623419 351 ntBASIC3.07□□□□□ -1.92
FOXA2Q9Y261 AC019226.1-201ENST00000625666 515 ntBASIC3.07□□□□□ -1.92
FOXA2Q9Y261 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXA2Q9Y261 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXA2Q9Y261 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
FOXA2Q9Y261 AC099063.3-201ENST00000642066 185 ntBASIC3.07□□□□□ -1.92
FOXA2Q9Y261 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA2Q9Y261 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA2Q9Y261 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXA2Q9Y261 TPTE2P4-201ENST00000258589 1605 ntBASIC3.07□□□□□ -1.92
FOXA2Q9Y261 FAM35BP-202ENST00000497389 3337 ntBASIC3.07□□□□□ -1.92
FOXA2Q9Y261 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.07□□□□□ -1.92
FOXA2Q9Y261 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXA2Q9Y261 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 RNA5SP88-201ENST00000365560 109 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 RNU6-432P-201ENST00000384196 109 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 MIR514A1-201ENST00000385133 98 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 MTND1P21-201ENST00000412991 285 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 MRPL50P2-201ENST00000416821 482 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 RPL7P2-201ENST00000427639 268 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AL354941.1-201ENST00000438600 464 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 MTND4LP22-201ENST00000508209 276 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 RNA5SP164-201ENST00000516533 110 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 CASP1P1-201ENST00000526345 212 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 UBE2NP1-201ENST00000545592 458 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC060771.1-201ENST00000582031 164 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 BNIP3P23-201ENST00000599655 511 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC015726.1-201ENST00000602353 681 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC005183.1-201ENST00000603687 1979 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC068831.8-201ENST00000620171 435 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC023510.2-201ENST00000622162 746 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC073530.2-201ENST00000623987 261 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 OR6C71P-202ENST00000641886 1107 ntBASIC3.06□□□□□ -1.92
FOXA2Q9Y261 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA2Q9Y261 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AC006504.1-201ENST00000562493 3666 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 HSPA8P1-201ENST00000425843 1833 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 ZNF542P-204ENST00000482727 1305 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 SNORA36C-201ENST00000384289 132 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 RHEBP3-201ENST00000411920 351 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 RPL21P40-201ENST00000428586 483 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 RPL35AP22-201ENST00000436855 335 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AC009237.8-201ENST00000445492 379 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AC006480.1-201ENST00000449887 378 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AL109741.2-201ENST00000455561 343 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 RPL30P5-201ENST00000494923 336 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 AC022447.3-201ENST00000506865 495 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 POU5F1P7-201ENST00000508759 541 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXA2Q9Y261 RNA5SP208-201ENST00000516156 78 ntBASIC3.05□□□□□ -1.92
FOXA2Q9Y261 RNU6-1256P-201ENST00000516539 103 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms