Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC125336.1-201ENST00000508893 2827 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AL360270.2-201ENST00000562952 5985 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 SAMMSON-226ENST00000642089 1582 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 RNY4P16-201ENST00000364768 94 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 OR1L6-202ENST00000373684 1044 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 SNORA51.8-201ENST00000384234 132 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-452P-201ENST00000384406 107 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 DBIP1-201ENST00000401435 260 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 RN7SKP126-201ENST00000411143 300 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 RPS15AP12-201ENST00000419498 388 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 VTI1BP4-201ENST00000427516 527 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 RPL23AP89-201ENST00000439324 255 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AL118520.1-201ENST00000450770 291 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AL136097.1-201ENST00000456945 913 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 LINC01399-202ENST00000458450 244 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AC004980.4-201ENST00000513375 203 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 SNORA40.14-201ENST00000516543 86 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 IGKV2-38-201ENST00000517443 247 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 MTND4P7-201ENST00000523876 130 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AC092376.2-201ENST00000622621 4116 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 SMG1P7-201ENST00000565246 2704 ntBASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDZRN3Q9UPQ7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AL034549.2-201ENST00000618285 3373 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 HSPA8P14-201ENST00000552265 1805 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 MIR335-201ENST00000362173 94 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 RN7SKP104-201ENST00000362605 328 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-1255P-201ENST00000363434 112 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 Y_RNA.304-201ENST00000365011 112 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 Y_RNA.352-201ENST00000365439 102 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 Y_RNA.353-201ENST00000365440 108 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-398P-201ENST00000384143 109 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 RNA5SP187-201ENST00000384400 119 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 RNU2-29P-201ENST00000410423 189 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC011933.1-201ENST00000413334 321 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 RPL12P34-201ENST00000424532 479 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 USMG5P1-201ENST00000425964 177 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 RPL19P16-201ENST00000433839 588 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC090602.1-201ENST00000469695 252 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC098583.1-201ENST00000480875 255 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC093852.1-201ENST00000503587 266 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC008716.1-201ENST00000511084 513 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC021146.3-201ENST00000511911 260 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 EIF3KP3-201ENST00000514461 639 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-897P-201ENST00000517135 105 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 CBX3P8-201ENST00000532412 525 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 MIR5583-1-201ENST00000580941 59 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AP001521.1-201ENST00000609150 300 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AC005520.5-201ENST00000613926 164 ntBASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms