Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 LRRC77P-213ENST00000637727 880 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 NR1H5P-201ENST00000452683 1377 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 AC233981.2-201ENST00000611524 1614 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 ZNF720P1-201ENST00000562403 1939 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHD7Q9P2D1 MIR96-201ENST00000362288 78 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 U3.37-201ENST00000408528 213 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.88□□□□□ -2.11
CHD7Q9P2D1 AC092991.1-201ENST00000477176 376 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 AC091544.1-201ENST00000484702 348 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD7Q9P2D1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 FO393414.1-201ENST00000428697 1184 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 USP9YP10-201ENST00000454868 628 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AL354943.1-201ENST00000572103 781 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AL645939.4-201ENST00000604495 135 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AC005336.3-201ENST00000623833 2679 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AL391987.6-201ENST00000305671 199 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 GOLGA5P1-201ENST00000507317 980 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AC107393.1-201ENST00000512403 346 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AC135279.1-201ENST00000543493 504 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AC010297.1-201ENST00000623948 149 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 AL359740.1-201ENST00000624340 592 ntBASIC1.87□□□□□ -2.11
CHD7Q9P2D1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHD7Q9P2D1 SNORA7.1-201ENST00000363750 139 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 Y_RNA.295-201ENST00000364918 102 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 TOMM22P1-201ENST00000418578 312 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 MIR6515-201ENST00000619843 57 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AL138787.1-202ENST00000437804 898 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AC002546.1-201ENST00000588041 2504 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 NDUFB4P5-201ENST00000415445 361 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 TOMM22P6-201ENST00000465035 409 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AC093331.1-201ENST00000521474 169 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 FAM92A1P1-201ENST00000528023 890 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 AC002984.1-201ENST00000591692 448 ntBASIC1.86□□□□□ -2.11
CHD7Q9P2D1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 AL021368.2-201ENST00000606125 5352 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 ZNF542P-204ENST00000482727 1305 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 RNA5SP160-201ENST00000364866 120 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 RNU6-342P-201ENST00000384521 104 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 SAR1AP4-201ENST00000429225 591 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 AC107015.1-201ENST00000466902 747 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 AC079804.2-201ENST00000490376 200 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 HMGB3P26-201ENST00000560051 582 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 Z98749.2-208ENST00000381646 500 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 MTND4LP16-201ENST00000440828 295 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 CBX3P5-201ENST00000552017 521 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 AP003499.2-201ENST00000624100 483 ntBASIC1.85□□□□□ -2.11
CHD7Q9P2D1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHD7Q9P2D1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CHD7Q9P2D1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CHD7Q9P2D1 SEPT7P7-201ENST00000420492 1301 ntBASIC1.84□□□□□ -2.11
CHD7Q9P2D1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.11
CHD7Q9P2D1 Y_RNA.178-201ENST00000363832 102 ntBASIC1.84□□□□□ -2.11
CHD7Q9P2D1 MTCYBP17-201ENST00000503579 789 ntBASIC1.84□□□□□ -2.11
CHD7Q9P2D1 AC008015.1-201ENST00000555505 465 ntBASIC1.84□□□□□ -2.11
CHD7Q9P2D1 MTCO3P13-201ENST00000577757 781 ntBASIC1.84□□□□□ -2.11
CHD7Q9P2D1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.84□□□□□ -2.11
CHD7Q9P2D1 AC006254.3-201ENST00000603353 884 ntBASIC1.84□□□□□ -2.11
CHD7Q9P2D1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.84□□□□□ -2.11
CHD7Q9P2D1 MIR6767-201ENST00000637302 66 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms