Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PSMD10P3-201ENST00000437000 448 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC079781.2-201ENST00000446424 169 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 RAD23BP3-201ENST00000454157 1152 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 PARP4P3-201ENST00000510265 317 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 BTF3P13-201ENST00000513224 490 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 Y_RNA.693-201ENST00000516641 110 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 RNU6-410P-201ENST00000517006 107 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC008033.2-201ENST00000542626 177 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC123904.3-201ENST00000547218 814 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AL359212.1-201ENST00000556608 614 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 RPL21P12-201ENST00000559810 515 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC012182.1-201ENST00000570133 895 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC098848.2-201ENST00000588023 330 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC005255.1-201ENST00000593748 216 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 RPL12P25-202ENST00000598100 674 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AP001330.5-201ENST00000607176 411 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC016769.4-201ENST00000616893 535 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC244100.1-202ENST00000621554 382 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC091905.4-201ENST00000623432 202 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 U3.53-201ENST00000628922 216 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC004925.1-201ENST00000624256 2706 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
MKS1Q9NXB0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
MKS1Q9NXB0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
MKS1Q9NXB0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.46□□□□□ -1.69
MKS1Q9NXB0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC138915.3-201ENST00000562908 1389 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 HSPE1P11-201ENST00000339579 310 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 RNU6-1120P-201ENST00000362988 108 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 Y_RNA.256-201ENST00000364594 104 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 RNU1-39P-201ENST00000383897 165 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 RPL21P24-201ENST00000413752 448 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 EI24P1-201ENST00000416584 867 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 BX510359.2-201ENST00000417920 305 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC079780.1-201ENST00000428259 207 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AL353748.1-201ENST00000440753 474 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC073850.1-201ENST00000449243 255 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 ABCF2P2-201ENST00000450549 296 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 RPS11P1-201ENST00000451072 473 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 HMGB3P30-201ENST00000457863 606 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 RPS7P7-201ENST00000463499 571 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 NDUFB4P9-201ENST00000511646 388 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC100870.1-201ENST00000522035 505 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 FAM60DP-201ENST00000524174 632 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AL512310.1-201ENST00000548639 172 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 ARL2BPP2-201ENST00000550907 489 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AL157687.1-201ENST00000554853 619 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AL512360.1-201ENST00000555346 234 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC010928.3-201ENST00000587712 541 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC008638.3-201ENST00000603341 463 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC025449.1-201ENST00000603896 529 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC067959.1-201ENST00000604334 379 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 Z84480.1-201ENST00000605131 311 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms