Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RPL32P34-201ENST00000486380 400 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 RNU6-826P-201ENST00000516827 104 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC023632.4-201ENST00000517783 191 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AP001189.2-201ENST00000527320 189 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC122134.1-202ENST00000569111 1201 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 DUXAP4-201ENST00000603046 613 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AL035411.2-201ENST00000604022 421 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC091953.5-201ENST00000622919 233 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 OR4G11P-202ENST00000642116 1414 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 RNU6-882P-201ENST00000391025 103 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 RNA5SP252-201ENST00000391131 119 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 PTMAP2-201ENST00000397627 327 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AL512633.1-201ENST00000399931 655 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 RPL7P27-201ENST00000403775 720 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 USP9YP19-201ENST00000412165 485 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AL353678.1-201ENST00000422735 741 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 RPL36AP6-201ENST00000435770 321 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AL121871.1-201ENST00000443413 436 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 RAC1P7-201ENST00000445367 377 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AC103975.1-201ENST00000482506 483 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AC010460.2-201ENST00000509054 677 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 MTND2P31-201ENST00000512602 616 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 SNORA70.16-201ENST00000516390 95 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AC024224.1-201ENST00000538284 609 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 SETP7-201ENST00000552169 453 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 BNIP3P24-201ENST00000593398 557 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AL031176.1-201ENST00000604554 466 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AP001521.1-201ENST00000609150 300 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AL359198.2-201ENST00000611836 194 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AC008759.3-201ENST00000613300 508 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 CYCSP41-201ENST00000616920 296 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 AC087821.2-201ENST00000637086 450 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 OR5BR1P-201ENST00000524992 1330 ntBASIC2.62□□□□□ -1.99
CLN6Q9NWW5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLN6Q9NWW5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC092447.7-201ENST00000422212 1621 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 Z99496.1-201ENST00000469424 1477 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 SNORA9.2-201ENST00000365361 133 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 MIR200C-201ENST00000384980 68 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 U3.19-201ENST00000390893 196 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 RPL7P8-201ENST00000411964 730 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 DPRXP1-201ENST00000426312 460 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC244505.3-201ENST00000454598 187 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 RPS29P12-201ENST00000460178 152 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC117440.1-201ENST00000474107 571 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 OR4G11P-201ENST00000492842 939 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC026414.1-201ENST00000504046 698 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 OR5AK1P-201ENST00000524837 922 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 HPRT1P3-201ENST00000539521 576 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 CR383656.7-201ENST00000548164 174 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC245036.5-201ENST00000596330 847 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AL606834.2-201ENST00000602954 668 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AL583856.2-201ENST00000606298 543 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AL627309.6-201ENST00000606857 840 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms