Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 PAICSP4-201ENST00000517543 1253 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AP002748.2-201ENST00000528671 348 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 OR5AP1P-201ENST00000529730 940 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS45Q9NRW7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS45Q9NRW7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS45Q9NRW7 MIR4307-201ENST00000582802 84 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC015871.2-201ENST00000603605 948 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC011816.2-201ENST00000607089 556 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AL589743.7-201ENST00000612637 233 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC008498.1-201ENST00000613012 531 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC233309.1-201ENST00000619522 751 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC039056.2-201ENST00000622261 511 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AL445363.3-201ENST00000623080 671 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AL603839.4-201ENST00000624658 1005 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 CRYM-AS1-204ENST00000637983 556 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC004925.1-201ENST00000624256 2706 ntBASIC4.3□□□□□ -1.72
VPS45Q9NRW7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS45Q9NRW7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS45Q9NRW7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS45Q9NRW7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 OR11H4-201ENST00000315409 1082 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 Y_RNA.6-201ENST00000362350 114 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 RNU6-359P-201ENST00000365466 108 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 RNU6-517P-201ENST00000384362 110 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 MIR7-3-201ENST00000384898 110 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 UBE2V1P10-201ENST00000414685 269 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 Z97055.1-201ENST00000419730 712 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 YME1L1P1-201ENST00000429435 297 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 OR2B8P-201ENST00000432841 938 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 RPL23AP89-201ENST00000439324 255 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 USP9YP12-201ENST00000450481 570 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 OR6K1P-201ENST00000456766 971 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 HMGB1P22-201ENST00000505315 124 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 MTND2P33-201ENST00000506452 1031 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 RN7SKP298-201ENST00000515950 94 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 MTND4LP18-201ENST00000526864 291 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AC107016.1-201ENST00000550463 337 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 MIR4528-201ENST00000577763 90 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 SNORD84-203ENST00000584275 78 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AC006566.1-201ENST00000608943 513 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AC108479.2-201ENST00000617314 601 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 AL356585.4-201ENST00000623078 1229 ntBASIC4.29□□□□□ -1.72
VPS45Q9NRW7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
VPS45Q9NRW7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 MAPK10-253ENST00000641010 4072 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC018555.1-201ENST00000567548 1980 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 RNA5SP502-201ENST00000362694 119 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 RNU6-1181P-201ENST00000384191 106 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 SNORA40.3-201ENST00000390964 122 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 Y_RNA.598-201ENST00000410480 95 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 JKAMPP1-201ENST00000413804 919 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC245052.5-201ENST00000416320 649 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 USP9YP13-201ENST00000417797 480 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC069157.1-201ENST00000421749 137 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL356583.2-201ENST00000426536 280 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 GOT2P5-201ENST00000433995 546 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 SKP1P1-201ENST00000438081 489 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 GDI2P2-201ENST00000445131 608 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms