Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC233728.2-201ENST00000425348 757 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 RPS29P17-201ENST00000430795 166 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 SETP8-201ENST00000435341 628 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL049734.2-201ENST00000441066 616 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL662791.1-201ENST00000441992 928 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC006011.1-201ENST00000442758 349 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL121871.1-201ENST00000443413 436 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL500522.2-201ENST00000448562 343 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 MTCO3P20-201ENST00000454926 688 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC080014.1-201ENST00000496877 1201 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC135721.1-201ENST00000497954 479 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC008958.1-201ENST00000511047 682 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC026726.1-201ENST00000512859 601 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC117532.1-201ENST00000514638 323 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 DEFB108D-201ENST00000527787 222 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AP002748.2-201ENST00000528671 348 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 SYF2P1-201ENST00000550658 413 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 ACTR3BP3-201ENST00000565577 979 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 U73023.1-201ENST00000603134 700 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AL391813.2-201ENST00000609113 322 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 Z69908.1-201ENST00000622603 247 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC095031.1-201ENST00000623685 672 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 RIOK3P1-201ENST00000418778 1528 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 RNU6-76P-201ENST00000384060 104 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 MIR19A-201ENST00000384878 82 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 RNU6-754P-201ENST00000391166 107 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 USP9YP13-201ENST00000417797 480 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC098826.1-201ENST00000433943 471 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 HMGB1P12-201ENST00000438594 598 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 RPS4XP4-201ENST00000443195 763 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AL590365.1-201ENST00000450788 243 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 NDUFA12P1-201ENST00000455914 406 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC108860.1-201ENST00000484521 383 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 RN7SL271P-201ENST00000487601 295 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 RPL7P24-201ENST00000493052 752 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC093824.1-201ENST00000508796 343 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC117522.2-201ENST00000510049 657 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 MTCO2P32-201ENST00000514865 403 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 TRAV8-5-201ENST00000537369 341 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 CCNG2P1-201ENST00000549521 1000 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 MIR4715-201ENST00000584117 79 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 PIGPP4-201ENST00000584447 307 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 MIR5684-201ENST00000585074 65 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AP001029.3-201ENST00000588063 596 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AL031985.2-201ENST00000600955 480 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AP001981.2-201ENST00000603241 418 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC239868.4-201ENST00000608318 671 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AC004067.1-201ENST00000608733 700 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 OR10AB1P-201ENST00000609613 938 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms