Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC114546.3-201ENST00000623582 1734 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 RNA5SP28-201ENST00000363841 119 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 RNU1-63P-201ENST00000383902 164 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 Y_RNA.384-201ENST00000383909 102 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC016769.3-201ENST00000396562 315 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 MIR548P-201ENST00000408336 84 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 RPS20P14-201ENST00000412545 360 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC137499.1-201ENST00000427602 88 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 ATP5JP1-201ENST00000431631 322 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC011998.1-201ENST00000433403 117 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC119618.1-201ENST00000434191 222 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 BNIP3P2-201ENST00000441221 577 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 MRPS17P3-201ENST00000465453 385 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AL163973.1-201ENST00000484753 577 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 RN7SL691P-201ENST00000494487 301 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 EIF4EP3-201ENST00000498782 656 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC026402.1-201ENST00000513642 170 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 RN7SKP116-201ENST00000516902 319 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC006504.6-201ENST00000590142 199 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 AC091979.2-201ENST00000607514 214 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 MIR3653-201ENST00000625572 110 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 RNA5SP196-201ENST00000625967 102 ntBASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
BCAS3Q9H6U6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC010329.2-201ENST00000595195 2737 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 MIR23B-201ENST00000384832 97 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 MIR514A2-201ENST00000385131 88 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 MIR514A3-201ENST00000385132 88 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AL024474.1-201ENST00000404655 591 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 SNORA11F-201ENST00000408237 128 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 RNU2-9P-201ENST00000410194 145 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 GTF2IP13-201ENST00000438487 386 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 GMFBP1-201ENST00000467831 427 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 RPL21P129-201ENST00000491732 478 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 RNA5SP337-201ENST00000517007 109 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 RNU6-1220P-201ENST00000517126 108 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 MRPL49P2-201ENST00000521066 465 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AP003730.1-201ENST00000524605 285 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 PSMA2P1-201ENST00000526365 646 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC007224.1-201ENST00000564410 144 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC005668.1-201ENST00000571142 476 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 MIR3160-1-201ENST00000577972 85 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 MIR3936-201ENST00000584304 110 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC106900.2-201ENST00000604994 317 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AC010201.1-201ENST00000605051 540 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AL022345.1-201ENST00000607292 135 ntBASIC4.94□□□□□ -1.62
BCAS3Q9H6U6 AL355816.1-201ENST00000607951 118 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms