Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 AP002001.2-201ENST00000529025 1469 ntBASIC4.08□□□□□ -1.76
EBF3Q9H4W6 OR8L1P-201ENST00000534005 955 ntBASIC4.08□□□□□ -1.76
EBF3Q9H4W6 YPEL5P3-201ENST00000547227 352 ntBASIC4.08□□□□□ -1.76
EBF3Q9H4W6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 ZNF285B-201ENST00000561698 1767 ntBASIC4.08□□□□□ -1.76
EBF3Q9H4W6 PCMTD1P2-201ENST00000565017 355 ntBASIC4.08□□□□□ -1.76
EBF3Q9H4W6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 SNORA51-201ENST00000606420 132 ntBASIC4.08□□□□□ -1.76
EBF3Q9H4W6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
EBF3Q9H4W6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AL049555.1-201ENST00000562834 1933 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 MTND5P17-201ENST00000418405 1603 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 RNU5F-6P-201ENST00000362979 116 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 XGY1-201ENST00000381172 446 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 U8.11-201ENST00000384699 133 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 U8.12-201ENST00000384701 133 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 RNU6-780P-201ENST00000391030 104 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AMD1P2-201ENST00000412936 992 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC093578.1-201ENST00000415219 368 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 OFD1P18Y-201ENST00000420889 959 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC073614.1-201ENST00000438690 650 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 DPPA3P1-201ENST00000448050 469 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 SLC31A1P1-201ENST00000451221 567 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 IFNWP4-201ENST00000453148 294 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 U8.18-201ENST00000459285 133 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 RPL7P15-201ENST00000461190 712 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 RPS20P21-201ENST00000466859 343 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AP000797.1-201ENST00000478870 387 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC108078.3-201ENST00000502633 489 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC046134.1-201ENST00000514454 666 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 NARSP2-201ENST00000518524 679 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC087276.1-201ENST00000529659 480 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC006960.3-201ENST00000561845 705 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC087499.8-201ENST00000578406 226 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC017100.2-201ENST00000584628 355 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 BNIP3P9-201ENST00000603714 553 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC069200.1-201ENST00000609511 323 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC018816.2-201ENST00000621460 353 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC124864.2-201ENST00000624736 186 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC116563.2-201ENST00000624751 535 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 CR392039.4-201ENST00000624968 501 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AC106871.1-201ENST00000568324 3102 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 AL133412.1-201ENST00000380194 2992 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.07□□□□□ -1.76
EBF3Q9H4W6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
EBF3Q9H4W6 MTND4P16-201ENST00000466108 1367 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 SNORD46.1-201ENST00000364139 104 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 MT-TL1-201ENST00000386347 75 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 RPL23AP29-201ENST00000397284 453 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 SNORA3.3-201ENST00000408712 125 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 HMGB3P23-201ENST00000414981 585 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AL139413.1-201ENST00000421309 217 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 NPM1P24-201ENST00000428039 894 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 NPM1P34-201ENST00000428821 893 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms