Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SNORA71.3-201ENST00000362582 128 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 RNU6-501P-201ENST00000364072 100 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.99□□□□□ -1.77
CDT1Q9H211 RNU6-348P-201ENST00000384386 107 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 RPL31P1-201ENST00000398116 372 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 Y_RNA.604-201ENST00000410574 102 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 MTND1P23-201ENST00000416931 372 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDT1Q9H211 HMGB3P20-201ENST00000417997 600 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 AL512649.1-201ENST00000428997 581 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 OR51AB1P-201ENST00000429046 620 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.99□□□□□ -1.77
CDT1Q9H211 SNRPEP7-201ENST00000438350 220 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 LSM1P1-201ENST00000438629 273 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.99□□□□□ -1.77
CDT1Q9H211 VN1R34P-201ENST00000447387 883 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 MTCO1P27-201ENST00000448269 226 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 ARPC3P5-201ENST00000448802 534 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 RPL31P50-201ENST00000471002 296 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.99□□□□□ -1.77
CDT1Q9H211 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.99□□□□□ -1.77
CDT1Q9H211 AC010342.1-201ENST00000514047 877 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 RN7SKP18-201ENST00000516005 275 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 RN7SKP234-201ENST00000517173 224 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 NRON-201ENST00000517270 370 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 AC016957.1-201ENST00000534895 309 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.99□□□□□ -1.77
CDT1Q9H211 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.99□□□□□ -1.77
CDT1Q9H211 MIR5186-201ENST00000577504 120 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 OR4G1P-201ENST00000588632 938 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AC012065.4-201ENST00000602445 679 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AC097468.3-201ENST00000607956 456 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AC012360.2-201ENST00000609349 391 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AC087241.4-201ENST00000612441 480 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AL158196.1-201ENST00000616786 434 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDT1Q9H211 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 AC009093.8-201ENST00000641769 292 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.99□□□□□ -1.77
CDT1Q9H211 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDT1Q9H211 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CDT1Q9H211 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDT1Q9H211 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDT1Q9H211 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDT1Q9H211 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDT1Q9H211 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.98□□□□□ -1.77
CDT1Q9H211 AC018555.1-201ENST00000567548 1980 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CDT1Q9H211 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CDT1Q9H211 RPL23AP57-201ENST00000332361 466 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 SNORD9-201ENST00000362566 104 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 SNORD82-201ENST00000365530 70 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 RNY3P10-201ENST00000384764 102 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 MIR153-1-201ENST00000384914 90 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AL031679.1-201ENST00000400616 525 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 MTCYBP36-201ENST00000404146 440 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.98□□□□□ -1.77
CDT1Q9H211 RPL31P2-201ENST00000413849 377 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.98□□□□□ -1.77
CDT1Q9H211 AC245054.1-201ENST00000420944 258 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.98□□□□□ -1.77
CDT1Q9H211 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 PSMA2P3-201ENST00000429685 675 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AC127537.2-201ENST00000439258 465 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.98□□□□□ -1.77
CDT1Q9H211 BX322784.1-201ENST00000455793 1077 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AC017015.1-201ENST00000477387 286 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AC106707.2-201ENST00000484182 374 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.98□□□□□ -1.77
CDT1Q9H211 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.98□□□□□ -1.77
CDT1Q9H211 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.98□□□□□ -1.77
CDT1Q9H211 AC093809.1-201ENST00000509155 340 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AC011352.1-201ENST00000512300 793 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AC005798.1-201ENST00000513715 387 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 FABP5P5-201ENST00000515537 406 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 RNU6-405P-201ENST00000516637 110 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 RANP9-201ENST00000519957 271 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 IGLVIV-53-201ENST00000520107 367 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AC022861.1-201ENST00000522981 663 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.98□□□□□ -1.77
CDT1Q9H211 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.98□□□□□ -1.77
CDT1Q9H211 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.98□□□□□ -1.77
CDT1Q9H211 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.98□□□□□ -1.77
CDT1Q9H211 AC245505.1-201ENST00000556398 224 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDT1Q9H211 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.98□□□□□ -1.77
CDT1Q9H211 BNIP3P23-201ENST00000599655 511 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AL009028.1-201ENST00000604895 802 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AL513477.2-201ENST00000607858 568 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms