Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 WBP11P1-201ENST00000562560 1931 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AC009120.2-204ENST00000621548 2032 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 MIR541-201ENST00000401360 84 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AL034379.1-201ENST00000423216 253 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 BX322639.1-202ENST00000423987 2213 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 RNU7-59P-201ENST00000459101 61 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AP000942.1-201ENST00000463969 747 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 RNU6-919P-201ENST00000516731 104 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 SCARNA24.2-201ENST00000516968 130 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 HSPE1P14-201ENST00000605812 302 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AC024255.1-201ENST00000614376 102 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AC025574.2-201ENST00000615621 514 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AC112200.1-201ENST00000625015 234 ntBASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.61□□□□□ -1.51
COL25A1Q9BXS0 HAUS6P2-201ENST00000433254 2404 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 BIN2P1-201ENST00000504996 1530 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 RNY4P28-201ENST00000365281 93 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 RNU6-708P-201ENST00000384217 107 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 MIR628-201ENST00000385229 95 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 RPS29P13-201ENST00000402041 169 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AC239809.1-201ENST00000450470 217 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 Z92846.1-201ENST00000456203 268 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AC008958.1-201ENST00000511047 682 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 Y_RNA.687-201ENST00000516558 91 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 RNU6-1092P-201ENST00000516955 87 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 SOD1P3-201ENST00000518682 454 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AL138889.2-201ENST00000603883 242 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 MFSD8-219ENST00000641228 2559 ntBASIC5.6□□□□□ -1.51
COL25A1Q9BXS0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms