Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC092608.2-201ENST00000624427 218 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 ADAM5-202ENST00000399789 1942 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 SOCS5P3-201ENST00000425115 1576 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 NXPH1-205ENST00000602349 1953 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AL450345.1-202ENST00000605741 3881 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC104118.1-201ENST00000607625 1589 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 SNURFL-201ENST00000309296 343 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 RNU6-1287P-201ENST00000362914 107 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 Y_RNA.389-201ENST00000383924 113 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 RNU6-1060P-201ENST00000384664 107 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 Y_RNA.552-201ENST00000384665 112 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 MIR19A-201ENST00000384878 82 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 SNORA48.4-201ENST00000391089 134 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 SNORA11B-201ENST00000408175 129 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 MIR548I3-201ENST00000408378 149 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 MIR548I1-201ENST00000408810 149 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC080125.1-201ENST00000414888 684 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AL356968.1-201ENST00000416622 474 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 RPL7P10-201ENST00000417407 739 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 RAC1P6-201ENST00000423911 575 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 RPL7P28-201ENST00000437739 740 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC005229.2-201ENST00000456995 399 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 PLGLA-201ENST00000465668 449 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC093270.2-201ENST00000486157 792 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC005726.1-201ENST00000494679 427 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC008526.1-201ENST00000509149 338 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 Y_RNA.668-201ENST00000516233 93 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 RNU6-1016P-201ENST00000516689 94 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC087854.1-201ENST00000519706 414 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 GNAI2P1-201ENST00000541815 315 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC135001.1-201ENST00000544546 283 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 MIR4646-201ENST00000580775 63 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 MIR5583-1-201ENST00000580941 59 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC011626.1-201ENST00000604710 562 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AL354984.3-201ENST00000604803 325 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AL355816.1-201ENST00000607951 118 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC020634.1-201ENST00000608701 549 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 EIF3FP1-201ENST00000613970 806 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AP001486.3-201ENST00000615334 372 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 ATP5A1P2-202ENST00000616464 443 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC118658.2-201ENST00000618697 459 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AL596245.1-201ENST00000618994 362 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC243312.2-201ENST00000623340 601 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC138627.2-201ENST00000624202 601 ntBASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.29□□□□□ -1.72
SSBP3Q9BWW4 AC008079.2-201ENST00000623543 20396 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC104260.2-201ENST00000623551 3497 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms