Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNU6-27P-201ENST00000516146 107 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 RNU6-1095P-201ENST00000516148 108 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC023043.3-201ENST00000593113 385 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC091057.2-201ENST00000602594 792 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC010738.1-201ENST00000604970 987 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AL138880.2-201ENST00000616214 239 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AP006248.3-201ENST00000623580 594 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 MFSD8-245ENST00000641743 948 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 MAPK10-266ENST00000641066 6555 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC073325.2-201ENST00000339545 159 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 RNU6-251P-201ENST00000363235 104 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 SNORD56.5-201ENST00000364281 72 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 OR1L1-202ENST00000373686 1083 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 SNORA51.6-201ENST00000384151 125 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 SNORA44-201ENST00000384584 132 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 MIR634-201ENST00000385208 97 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 MIR493-201ENST00000385254 89 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 SNORD67-201ENST00000390833 111 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AL139098.1-201ENST00000407291 389 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 RNA5SP274-201ENST00000410484 108 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AL590762.3-201ENST00000436372 640 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 HMGB3P6-201ENST00000444896 598 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC009961.3-201ENST00000449832 765 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AP001207.2-201ENST00000519490 539 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC022080.3-201ENST00000544433 482 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC090695.1-201ENST00000561269 1222 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC093519.1-201ENST00000566109 298 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC079228.1-201ENST00000624774 1049 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AC091925.2-201ENST00000625059 256 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 GDI2P1-201ENST00000429312 1336 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AL513185.3-201ENST00000433335 1300 ntBASIC2.07□□□□□ -2.08
UPK3BQ9BT76 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
UPK3BQ9BT76 ZNF849P-201ENST00000594711 1566 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 MTND5P24-201ENST00000438892 1767 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 SNORA9.2-201ENST00000365361 133 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 SNORD88.1-201ENST00000408684 91 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AL512661.1-201ENST00000434586 1253 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 MUPP-201ENST00000438111 566 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC107083.1-201ENST00000439643 279 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AL050341.1-201ENST00000447743 313 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC117440.1-201ENST00000474107 571 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AIG1P1-201ENST00000503376 148 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 PRELID3BP6-201ENST00000503839 571 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 RNU6-362P-201ENST00000516736 90 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 RNU6-826P-201ENST00000516827 104 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC009812.2-201ENST00000517657 457 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 MTCO1P40-201ENST00000574371 625 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.06□□□□□ -2.08
UPK3BQ9BT76 RN7SL622P-201ENST00000585292 275 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC011471.1-201ENST00000585766 187 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AL451007.1-201ENST00000595491 289 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 NUTF2P8-201ENST00000604593 363 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 AC233263.6-201ENST00000631132 1963 ntBASIC2.06□□□□□ -2.08
UPK3BQ9BT76 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms