Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CYCSP25-201ENST00000525280 316 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AL157871.3-201ENST00000557231 293 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC004805.3-201ENST00000603178 310 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 MIR7109-201ENST00000613748 65 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 AL445647.2-201ENST00000615170 130 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC007938.2-201ENST00000604666 2634 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USB1Q9BQ65 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USB1Q9BQ65 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 AC083843.3-201ENST00000623679 2186 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USB1Q9BQ65 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 RNA5SP52-201ENST00000362448 134 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 RNU6-395P-201ENST00000365662 106 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 SNORA70H-201ENST00000383910 135 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 SNORA70J-201ENST00000384182 135 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 RNU4-78P-201ENST00000410940 126 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 RPL23AP36-201ENST00000413895 458 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 IGHV5-78-201ENST00000450948 295 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 AL356981.1-201ENST00000454879 684 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 RN7SL552P-201ENST00000462094 276 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 AC063943.2-201ENST00000495697 534 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 SNORA31.22-201ENST00000517204 135 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 AC090617.3-201ENST00000573670 475 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 AC108706.1-201ENST00000611053 297 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 MIR6085-201ENST00000618314 110 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 MIR6811-201ENST00000620409 58 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 MIR4496-201ENST00000635896 61 ntBASIC5.76□□□□□ -1.49
USB1Q9BQ65 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USB1Q9BQ65 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USB1Q9BQ65 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USB1Q9BQ65 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USB1Q9BQ65 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.76□□□□□ -1.49
USB1Q9BQ65 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USB1Q9BQ65 AC093278.2-201ENST00000564956 2485 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
USB1Q9BQ65 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 RNA5SP333-201ENST00000363466 118 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 RNA5SP334-201ENST00000364825 118 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
USB1Q9BQ65 U3.52-201ENST00000384034 216 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 RNU6-76P-201ENST00000384060 104 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 AL713922.1-201ENST00000416477 747 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AL117339.3-201ENST00000418733 162 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC099782.1-201ENST00000425889 474 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC008065.1-201ENST00000428525 348 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 Y_RNA.638-201ENST00000459374 113 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC108161.1-201ENST00000461060 402 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC018638.3-201ENST00000461273 132 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 RN7SL168P-201ENST00000463821 279 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AK3P2-201ENST00000507976 429 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC107958.1-201ENST00000556576 290 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC026956.1-201ENST00000558741 396 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 MIR4271-201ENST00000582451 67 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 MIR4282-201ENST00000583613 67 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms