Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.34□□□□□ -1.71
SMOQ99835 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SMOQ99835 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SMOQ99835 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMOQ99835 SPRR2C-201ENST00000290702 219 ntBASIC4.34□□□□□ -1.71
SMOQ99835 Y_RNA.159-201ENST00000363674 87 ntBASIC4.34□□□□□ -1.71
SMOQ99835 RNVU1-3-201ENST00000364313 161 ntBASIC4.34□□□□□ -1.71
SMOQ99835 RN7SKP227-201ENST00000364445 330 ntBASIC4.34□□□□□ -1.71
SMOQ99835 MIR23A-201ENST00000385245 73 ntBASIC4.34□□□□□ -1.71
SMOQ99835 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SMOQ99835 RAP1BP3-201ENST00000407180 549 ntBASIC4.34□□□□□ -1.71
SMOQ99835 CYCSP10-201ENST00000417973 294 ntBASIC4.34□□□□□ -1.71
SMOQ99835 HMGB3P20-201ENST00000417997 600 ntBASIC4.34□□□□□ -1.71
SMOQ99835 AC007283.2-201ENST00000424739 197 ntBASIC4.34□□□□□ -1.71
SMOQ99835 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.34□□□□□ -1.71
SMOQ99835 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.34□□□□□ -1.71
SMOQ99835 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.34□□□□□ -1.71
SMOQ99835 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.34□□□□□ -1.71
SMOQ99835 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.34□□□□□ -1.71
SMOQ99835 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.34□□□□□ -1.71
SMOQ99835 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.34□□□□□ -1.71
SMOQ99835 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.34□□□□□ -1.71
SMOQ99835 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.34□□□□□ -1.71
SMOQ99835 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.34□□□□□ -1.71
SMOQ99835 AC008549.1-201ENST00000512900 643 ntBASIC4.34□□□□□ -1.71
SMOQ99835 RN7SKP82-201ENST00000516786 223 ntBASIC4.34□□□□□ -1.71
SMOQ99835 AP000907.2-201ENST00000530827 353 ntBASIC4.34□□□□□ -1.71
SMOQ99835 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SMOQ99835 AL157687.1-201ENST00000554853 619 ntBASIC4.34□□□□□ -1.71
SMOQ99835 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.34□□□□□ -1.71
SMOQ99835 MIR3167-201ENST00000579623 85 ntBASIC4.34□□□□□ -1.71
SMOQ99835 AC060771.1-201ENST00000582031 164 ntBASIC4.34□□□□□ -1.71
SMOQ99835 AC004853.1-201ENST00000604902 698 ntBASIC4.34□□□□□ -1.71
SMOQ99835 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.34□□□□□ -1.71
SMOQ99835 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.34□□□□□ -1.71
SMOQ99835 AC002553.4-201ENST00000616896 331 ntBASIC4.34□□□□□ -1.71
SMOQ99835 MIR7154-201ENST00000620673 73 ntBASIC4.34□□□□□ -1.71
SMOQ99835 DUXAP9-208ENST00000622815 614 ntBASIC4.34□□□□□ -1.71
SMOQ99835 AC019226.1-201ENST00000625666 515 ntBASIC4.34□□□□□ -1.71
SMOQ99835 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMOQ99835 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMOQ99835 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMOQ99835 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SMOQ99835 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.34□□□□□ -1.71
SMOQ99835 SAGE2P-201ENST00000420011 2126 ntBASIC4.34□□□□□ -1.71
SMOQ99835 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SMOQ99835 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SMOQ99835 RNY4P16-201ENST00000364768 94 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AL356967.1-201ENST00000406305 431 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.33□□□□□ -1.72
SMOQ99835 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.33□□□□□ -1.72
SMOQ99835 AL353193.1-201ENST00000421444 268 ntBASIC4.33□□□□□ -1.72
SMOQ99835 MTCO1P20-201ENST00000425366 358 ntBASIC4.33□□□□□ -1.72
SMOQ99835 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.33□□□□□ -1.72
SMOQ99835 AL138785.1-201ENST00000425821 331 ntBASIC4.33□□□□□ -1.72
SMOQ99835 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.33□□□□□ -1.72
SMOQ99835 EZH2P1-201ENST00000431167 291 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AL358472.1-201ENST00000431295 329 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.33□□□□□ -1.72
SMOQ99835 AL121601.2-201ENST00000438019 707 ntBASIC4.33□□□□□ -1.72
SMOQ99835 HSFY6P-201ENST00000445573 403 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.33□□□□□ -1.72
SMOQ99835 DPPA3P1-201ENST00000448050 469 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AL353691.1-201ENST00000451332 387 ntBASIC4.33□□□□□ -1.72
SMOQ99835 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.33□□□□□ -1.72
SMOQ99835 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.33□□□□□ -1.72
SMOQ99835 AC021382.1-201ENST00000483523 359 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AC055855.1-201ENST00000489563 579 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.33□□□□□ -1.72
SMOQ99835 HIGD1AP3-201ENST00000515857 278 ntBASIC4.33□□□□□ -1.72
SMOQ99835 SNORD116-26-201ENST00000516006 96 ntBASIC4.33□□□□□ -1.72
SMOQ99835 Y_RNA.693-201ENST00000516641 110 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.33□□□□□ -1.72
SMOQ99835 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SMOQ99835 AL512360.1-201ENST00000555346 234 ntBASIC4.33□□□□□ -1.72
SMOQ99835 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.33□□□□□ -1.72
SMOQ99835 RPL23AP87-202ENST00000573039 466 ntBASIC4.33□□□□□ -1.72
SMOQ99835 MIR5684-201ENST00000585074 65 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AC068790.5-201ENST00000602741 355 ntBASIC4.33□□□□□ -1.72
SMOQ99835 MIR432-201ENST00000606207 94 ntBASIC4.33□□□□□ -1.72
SMOQ99835 RNU4-89P-201ENST00000607443 133 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AC017083.3-201ENST00000609955 700 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AC092794.2-201ENST00000620933 563 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AP006248.2-201ENST00000623309 592 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AC139792.3-201ENST00000623525 224 ntBASIC4.33□□□□□ -1.72
SMOQ99835 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.33□□□□□ -1.72
SMOQ99835 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SMOQ99835 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SMOQ99835 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.32□□□□□ -1.72
SMOQ99835 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.32□□□□□ -1.72
SMOQ99835 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
SMOQ99835 Y_RNA.89-201ENST00000363031 102 ntBASIC4.32□□□□□ -1.72
SMOQ99835 RNU6-1085P-201ENST00000363576 107 ntBASIC4.32□□□□□ -1.72
SMOQ99835 RNU6-534P-201ENST00000364877 106 ntBASIC4.32□□□□□ -1.72
SMOQ99835 RNA5SP283-201ENST00000365604 119 ntBASIC4.32□□□□□ -1.72
SMOQ99835 RNU6-483P-201ENST00000384088 108 ntBASIC4.32□□□□□ -1.72
SMOQ99835 SNORA37-201ENST00000384504 129 ntBASIC4.32□□□□□ -1.72
SMOQ99835 U3.20-201ENST00000390909 217 ntBASIC4.32□□□□□ -1.72
SMOQ99835 RPL21P65-201ENST00000406094 466 ntBASIC4.32□□□□□ -1.72
SMOQ99835 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms