Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.86□□□□□ -1.79
NPAS1Q99742 RPL31P35-201ENST00000431058 377 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC009961.2-201ENST00000435771 251 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 RPL35AP22-201ENST00000436855 335 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.86□□□□□ -1.79
NPAS1Q99742 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.86□□□□□ -1.79
NPAS1Q99742 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.86□□□□□ -1.79
NPAS1Q99742 AC108059.3-201ENST00000456388 214 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NPAS1Q99742 AC109327.1-201ENST00000471666 403 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 RPL9P33-201ENST00000484311 566 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC108475.1-201ENST00000507880 950 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC114797.1-201ENST00000514003 728 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 Vault.3-201ENST00000516676 95 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 MTCO2P4-201ENST00000517968 247 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.86□□□□□ -1.79
NPAS1Q99742 DEFB108A-201ENST00000530110 222 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC006064.5-201ENST00000541782 248 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.86□□□□□ -1.79
NPAS1Q99742 AC087883.1-201ENST00000551882 391 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC010546.1-201ENST00000569391 485 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.86□□□□□ -1.79
NPAS1Q99742 MIR3939-201ENST00000582614 106 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
NPAS1Q99742 SNRPGP15-201ENST00000600149 222 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AL161729.3-201ENST00000603533 673 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC245014.2-201ENST00000603689 287 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC008277.2-201ENST00000605196 797 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC246785.4-201ENST00000605374 287 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.86□□□□□ -1.79
NPAS1Q99742 AC091304.9-201ENST00000612091 226 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC013476.2-201ENST00000614456 459 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AL445567.2-201ENST00000618935 498 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS1Q99742 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.86□□□□□ -1.79
NPAS1Q99742 AC244258.1-201ENST00000637553 1071 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 LRRC77P-213ENST00000637727 880 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 AC099654.12-201ENST00000639868 649 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.86□□□□□ -1.79
NPAS1Q99742 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS1Q99742 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.86□□□□□ -1.79
NPAS1Q99742 MTND5P26-201ENST00000426018 1752 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS1Q99742 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS1Q99742 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS1Q99742 AC004925.1-201ENST00000624256 2706 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.86□□□□□ -1.79
NPAS1Q99742 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPAS1Q99742 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.85□□□□□ -1.79
NPAS1Q99742 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.85□□□□□ -1.79
NPAS1Q99742 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC090337.1-201ENST00000579651 2074 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
NPAS1Q99742 Y_RNA.41-201ENST00000362646 102 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPAS1Q99742 RPL23AP32-201ENST00000395315 459 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AL138878.1-201ENST00000405131 347 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 RN7SKP177-201ENST00000410567 355 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 RNU2-62P-201ENST00000410868 191 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 ELOCP4-201ENST00000420090 333 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 Z74696.2-201ENST00000436514 498 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 MTND1P1-201ENST00000445453 368 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.85□□□□□ -1.79
NPAS1Q99742 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AC007967.1-201ENST00000455422 1159 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 RNU7-59P-201ENST00000459101 61 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC105137.1-201ENST00000484355 562 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 RPL35P6-201ENST00000490024 372 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AC091167.1-201ENST00000492017 396 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NPAS1Q99742 MLLT10P2-201ENST00000506434 249 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 MTND2P33-201ENST00000506452 1031 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.85□□□□□ -1.79
NPAS1Q99742 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC107934.1-201ENST00000522215 217 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AP000857.1-201ENST00000532151 543 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AC016957.1-201ENST00000534895 309 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 CBX3P5-201ENST00000552017 521 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms