Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LITAFQ99732 RPL23AP38-201ENST00000423801 469 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.96□□□□□ -1.94
LITAFQ99732 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.96□□□□□ -1.94
LITAFQ99732 CKS1BP5-201ENST00000434172 273 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 MRPS18BP2-201ENST00000434310 759 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LITAFQ99732 OR52B5P-201ENST00000435337 951 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RPL35AP22-201ENST00000436855 335 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 MTND6P18-201ENST00000439477 513 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC016696.1-201ENST00000446949 318 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 AC092001.1-201ENST00000453012 261 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 snoU13.3-201ENST00000459441 104 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC006512.1-201ENST00000468816 291 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RPS3AP50-201ENST00000487064 803 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RN7SL466P-201ENST00000497546 295 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC135721.1-201ENST00000497954 479 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC2.96□□□□□ -1.94
LITAFQ99732 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 PGAM1P13-201ENST00000507497 754 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AL592156.1-201ENST00000508758 304 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 SNORD46.2-201ENST00000516021 102 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RNU2-10P-201ENST00000516375 211 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 MIR2114-201ENST00000516645 80 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RNU6-64P-201ENST00000517119 105 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 AC128657.1-201ENST00000549459 145 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.96□□□□□ -1.94
LITAFQ99732 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 OR4K8P-201ENST00000578842 1048 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC015917.1-201ENST00000579654 510 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC011447.4-201ENST00000587562 111 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.96□□□□□ -1.94
LITAFQ99732 IGKV1OR2-118-201ENST00000603238 347 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC025946.2-201ENST00000603398 234 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC112230.1-201ENST00000604342 547 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AL391358.1-201ENST00000605342 190 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AL121992.2-201ENST00000606262 256 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.96□□□□□ -1.94
LITAFQ99732 AP001521.2-201ENST00000608772 546 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 FAM27B-201ENST00000610601 213 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC244100.1-202ENST00000621554 382 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC093648.1-201ENST00000623546 606 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.96□□□□□ -1.94
LITAFQ99732 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LITAFQ99732 MTCO1P9-201ENST00000505577 1534 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 CPHL1P-201ENST00000461341 3407 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.96□□□□□ -1.94
LITAFQ99732 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC2.96□□□□□ -1.94
LITAFQ99732 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.96□□□□□ -1.94
LITAFQ99732 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LITAFQ99732 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.96□□□□□ -1.94
LITAFQ99732 AL049555.1-201ENST00000562834 1933 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
LITAFQ99732 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.95□□□□□ -1.94
LITAFQ99732 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
LITAFQ99732 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LITAFQ99732 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.95□□□□□ -1.94
LITAFQ99732 HSPE1P11-201ENST00000339579 310 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 Y_RNA.255-201ENST00000364581 97 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 RNU6-996P-201ENST00000365438 107 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LITAFQ99732 RNU6-637P-201ENST00000384050 107 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 RNU6-754P-201ENST00000391166 107 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 IL6-206ENST00000407492 926 ntTSL 3 BASIC2.95□□□□□ -1.94
LITAFQ99732 SNORA3C-201ENST00000408792 125 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.95□□□□□ -1.94
LITAFQ99732 SDCBPP3-201ENST00000419629 891 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.95□□□□□ -1.94
LITAFQ99732 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC2.95□□□□□ -1.94
LITAFQ99732 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.95□□□□□ -1.94
LITAFQ99732 OR2AS1P-201ENST00000427827 319 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 MED13P1-201ENST00000428342 171 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.95□□□□□ -1.94
LITAFQ99732 AL627308.1-201ENST00000435693 821 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 RPL7P28-201ENST00000437739 740 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 AC073109.1-201ENST00000445066 978 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.95□□□□□ -1.94
LITAFQ99732 AC007967.1-201ENST00000455422 1159 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 RPS5P7-201ENST00000456664 608 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 AMD1P1-201ENST00000457220 922 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.95□□□□□ -1.94
LITAFQ99732 AC063943.1-201ENST00000465434 453 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 AC078785.3-201ENST00000476607 425 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.95□□□□□ -1.94
LITAFQ99732 RPL21P103-201ENST00000479921 488 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 RN7SL184P-201ENST00000488308 297 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LITAFQ99732 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.95□□□□□ -1.94
LITAFQ99732 AC146944.2-203ENST00000502493 354 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 AC108145.1-201ENST00000503770 153 ntBASIC2.95□□□□□ -1.94
LITAFQ99732 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.95□□□□□ -1.94
LITAFQ99732 GAPDHP56-201ENST00000506031 988 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms