Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.64□□□□□ -1.99
VAT1Q99536 TPRKBP1-201ENST00000456243 481 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 PABPC1P3-201ENST00000469174 459 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VAT1Q99536 SETP6-201ENST00000479329 568 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.64□□□□□ -1.99
VAT1Q99536 AC098799.2-201ENST00000509466 868 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 SNORA31.1-201ENST00000515993 133 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 SNORA31.5-201ENST00000516190 133 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 RNU6-826P-201ENST00000516827 104 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.64□□□□□ -1.99
VAT1Q99536 COX6CP8-201ENST00000522620 226 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VAT1Q99536 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.64□□□□□ -1.99
VAT1Q99536 LSM6P2-201ENST00000552208 177 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.64□□□□□ -1.99
VAT1Q99536 BPTFP1-201ENST00000579209 492 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.64□□□□□ -1.99
VAT1Q99536 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.64□□□□□ -1.99
VAT1Q99536 AC012669.1-201ENST00000603209 283 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 AC007619.2-201ENST00000605743 379 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
VAT1Q99536 AC008432.1-201ENST00000615912 1320 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VAT1Q99536 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.63□□□□□ -1.99
VAT1Q99536 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VAT1Q99536 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.63□□□□□ -1.99
VAT1Q99536 RNU6-1074P-201ENST00000383995 104 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 MIR483-201ENST00000385070 76 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 RNA5SP210-201ENST00000391034 120 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 RPL21P75-201ENST00000396599 483 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 RPL21P28-201ENST00000401418 483 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AL592114.1-201ENST00000403842 483 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.63□□□□□ -1.99
VAT1Q99536 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VAT1Q99536 RPL21P32-201ENST00000419877 477 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC019097.1-201ENST00000424783 735 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.63□□□□□ -1.99
VAT1Q99536 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.63□□□□□ -1.99
VAT1Q99536 CACYBPP2-201ENST00000453625 678 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 OR6K1P-201ENST00000456766 971 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 RPL21P39-201ENST00000463605 483 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC104472.2-201ENST00000469035 601 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC011979.1-201ENST00000472300 483 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 RPL21P93-201ENST00000480465 489 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC233702.1-201ENST00000482905 502 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 VPS26AP1-201ENST00000483197 979 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC087190.1-201ENST00000484462 480 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.63□□□□□ -1.99
VAT1Q99536 AC093591.1-201ENST00000491435 481 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 RPL21P16-201ENST00000495531 483 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.63□□□□□ -1.99
VAT1Q99536 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.63□□□□□ -1.99
VAT1Q99536 RN7SKP132-201ENST00000516001 208 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 SNORA76.2-201ENST00000517095 137 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AP003102.1-201ENST00000525638 661 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.63□□□□□ -1.99
VAT1Q99536 OR5BN1P-201ENST00000532955 829 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 HSPE1P20-201ENST00000538133 289 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC243972.3-201ENST00000539655 198 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.63□□□□□ -1.99
VAT1Q99536 AL391156.1-201ENST00000554965 554 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.63□□□□□ -1.99
VAT1Q99536 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.63□□□□□ -1.99
VAT1Q99536 GTF3AP2-201ENST00000557014 266 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC060766.3-201ENST00000591442 263 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 AC009220.3-201ENST00000604318 586 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VAT1Q99536 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
VAT1Q99536 AC006378.2-201ENST00000623178 2476 ntBASIC2.63□□□□□ -1.99
VAT1Q99536 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
VAT1Q99536 AL049780.3-201ENST00000624612 1583 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 SNORD62.1-201ENST00000362541 86 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.62□□□□□ -1.99
VAT1Q99536 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 RNA5SP38-201ENST00000410750 119 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AL096701.2-201ENST00000416920 238 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 SSXP9-201ENST00000417503 292 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.62□□□□□ -1.99
VAT1Q99536 COTL1P1-201ENST00000422309 375 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 RPS6P14-201ENST00000425165 719 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC063976.3-201ENST00000426849 329 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 RPL31P54-201ENST00000429803 370 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.62□□□□□ -1.99
VAT1Q99536 MTCYBP34-201ENST00000439552 670 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC000041.1-201ENST00000439655 175 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 RPS12P2-201ENST00000439728 269 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.62□□□□□ -1.99
VAT1Q99536 AP000936.2-201ENST00000447151 681 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.62□□□□□ -1.99
VAT1Q99536 RPS20P24-201ENST00000457473 361 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 SNORD109B-201ENST00000458961 67 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 RNA5SP310-201ENST00000459084 116 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 SNORD109A-201ENST00000459128 67 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC008571.1-201ENST00000467232 300 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.62□□□□□ -1.99
VAT1Q99536 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.62□□□□□ -1.99
VAT1Q99536 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms