Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL353193.1-201ENST00000421444 268 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 UBE2V1P13-201ENST00000436983 439 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC108734.1-201ENST00000439549 399 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AL049734.2-201ENST00000441066 616 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC114495.1-201ENST00000441274 436 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC021382.1-201ENST00000483523 359 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC041039.1-201ENST00000485656 536 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC023194.1-201ENST00000493084 308 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 RNU6-507P-201ENST00000516045 100 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC107934.1-201ENST00000522215 217 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AP001646.1-201ENST00000527936 915 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AP000907.2-201ENST00000530827 353 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC135001.1-201ENST00000544546 283 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 SETP2-201ENST00000553886 926 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC068446.3-201ENST00000555285 382 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 MIR4697-201ENST00000582977 78 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC004853.1-201ENST00000604902 698 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC017083.3-201ENST00000609955 700 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AL020991.1-201ENST00000612314 373 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 AC108467.2-201ENST00000617640 1597 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 Z73965.1-201ENST00000623412 2297 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX18Q96RF0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX18Q96RF0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX18Q96RF0 RNU1-15P-201ENST00000353977 144 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 Y_RNA.38-201ENST00000362617 102 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 Y_RNA.159-201ENST00000363674 87 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 RNU6-694P-201ENST00000364071 147 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 RNY4P16-201ENST00000364768 94 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 RNU1-63P-201ENST00000383902 164 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 SNORA20.2-201ENST00000383922 131 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 MT-TL1-201ENST00000386347 75 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 U3.20-201ENST00000390909 217 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX18Q96RF0 AL049693.1-201ENST00000402760 611 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 RN7SKP285-201ENST00000410137 318 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 RNA5SP306-201ENST00000411087 107 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC007283.2-201ENST00000424739 197 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC016712.1-201ENST00000431088 378 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 USP12PX-201ENST00000432383 1057 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 MTND4P25-201ENST00000441039 533 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 RPL21P133-201ENST00000443666 476 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 TPT1P12-201ENST00000448968 492 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 IFNWP4-201ENST00000453148 294 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 snoU13.1-201ENST00000459157 104 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC010326.1-201ENST00000462726 602 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 RNU6-27P-201ENST00000516146 107 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 RNU6-358P-201ENST00000516564 75 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 SNORA20.3-201ENST00000516880 132 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 RN7SKP92-201ENST00000517266 244 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 AL161713.1-201ENST00000555538 145 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 RPL23AP97-201ENST00000568955 471 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 MIR3167-201ENST00000579623 85 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 MIR4644-201ENST00000579929 84 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC060771.1-201ENST00000582031 164 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 UBE2L4-201ENST00000587688 464 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC008752.3-201ENST00000588113 712 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 AL049634.3-201ENST00000604968 457 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC019193.2-201ENST00000610012 634 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AL138721.1-201ENST00000616756 179 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms