Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC104687.2-201ENST00000604442 342 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AP001521.2-201ENST00000608772 546 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 Z82243.1-201ENST00000609432 473 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC090510.2-201ENST00000617465 629 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC068870.2-201ENST00000620635 389 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AL357559.1-201ENST00000622228 274 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC055839.1-201ENST00000634467 498 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.65
PTCHD1Q96NR3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC092376.2-201ENST00000622621 4116 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 API5P2-201ENST00000397055 1498 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 Y_RNA.146-201ENST00000363549 102 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RNU6-82P-201ENST00000363970 107 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RNU6-637P-201ENST00000384050 107 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 Y_RNA.459-201ENST00000384251 102 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 SNORA66-201ENST00000384792 133 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RPL21P67-201ENST00000402896 478 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RN7SKP158-201ENST00000410453 326 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RNU4-46P-201ENST00000410818 138 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AL591848.1-201ENST00000413092 322 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC005517.2-201ENST00000424673 553 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RPL7P46-201ENST00000425129 740 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 COX6CP13-201ENST00000428703 226 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 PPIAP3-201ENST00000450588 505 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC245028.2-201ENST00000458673 253 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 snoU13.20-201ENST00000459180 104 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RN7SL610P-201ENST00000463845 291 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RN7SL329P-201ENST00000467740 299 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 RN7SL97P-201ENST00000486780 299 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC010350.1-201ENST00000504908 231 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC090136.1-201ENST00000520009 240 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 HMGN1P28-201ENST00000521340 364 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 MIR4790-201ENST00000577799 79 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 MIR4443-201ENST00000585052 53 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC105254.2-201ENST00000603636 436 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 CYP2C61P-201ENST00000604072 290 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 AC063976.2-201ENST00000425667 3556 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.77□□□□□ -1.65
PTCHD1Q96NR3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 NEAT1-202ENST00000501122 22743 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 Y_RNA.187-201ENST00000363918 113 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 Y_RNA.197-201ENST00000364004 102 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 RNU6-639P-201ENST00000384074 107 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 MT-TC-201ENST00000387405 66 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 RNU6-754P-201ENST00000391166 107 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 SOD2P1-201ENST00000396543 562 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AL109755.1-201ENST00000401791 649 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 POLHP1-201ENST00000411806 470 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 COX5BP7-201ENST00000414780 274 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 RPL30P3-201ENST00000424262 333 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC093106.2-201ENST00000428212 385 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC005019.1-201ENST00000436455 431 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 PTMAP3-201ENST00000447474 330 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC010655.1-201ENST00000449336 292 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 snoU109.4-201ENST00000458953 143 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 MTND5P16-201ENST00000460269 1703 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC093270.2-201ENST00000486157 792 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 RN7SL591P-201ENST00000496150 292 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 TRBVA-201ENST00000498804 316 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 COX6B1P5-201ENST00000509843 249 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC093303.1-201ENST00000514549 295 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms