Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CALR3Q96L12 AC068870.1-201ENST00000563737 2455 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CALR3Q96L12 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
CALR3Q96L12 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CALR3Q96L12 AC000123.3-201ENST00000624029 4975 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 AC025031.4-201ENST00000621248 3271 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CALR3Q96L12 SDAD1P2-201ENST00000441308 2028 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 AC074029.4-201ENST00000624796 1859 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
CALR3Q96L12 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CALR3Q96L12 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CALR3Q96L12 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 RNU1-150P-201ENST00000362491 162 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 MIR551A-201ENST00000385042 96 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.86□□□□□ -1.47
CALR3Q96L12 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.86□□□□□ -1.47
CALR3Q96L12 HSPE1P6-201ENST00000479457 291 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 RPL7P42-201ENST00000481005 679 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 AC009901.1-201ENST00000506703 541 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 RNU6-1046P-201ENST00000516538 107 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 RNU6-914P-201ENST00000516749 109 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 RNA5SP340-201ENST00000517132 107 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 AC009902.1-201ENST00000519351 183 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 AC022360.1-201ENST00000521058 340 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.86□□□□□ -1.47
CALR3Q96L12 HMGB3P26-201ENST00000560051 582 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 AL390726.5-202ENST00000564800 256 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.86□□□□□ -1.47
CALR3Q96L12 RN7SL652P-201ENST00000577769 300 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 MIR3154-201ENST00000577829 84 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 AC100830.2-201ENST00000581636 240 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.86□□□□□ -1.47
CALR3Q96L12 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.86□□□□□ -1.47
CALR3Q96L12 AC034102.8-201ENST00000615146 484 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.86□□□□□ -1.47
CALR3Q96L12 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.86□□□□□ -1.47
CALR3Q96L12 AC091925.1-201ENST00000623204 462 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.86□□□□□ -1.47
CALR3Q96L12 AL356489.2-201ENST00000566968 3528 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.86□□□□□ -1.47
CALR3Q96L12 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.86□□□□□ -1.47
CALR3Q96L12 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CALR3Q96L12 AC011755.1-201ENST00000623763 2049 ntBASIC5.86□□□□□ -1.47
CALR3Q96L12 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CALR3Q96L12 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CALR3Q96L12 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CALR3Q96L12 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CALR3Q96L12 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CALR3Q96L12 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.85□□□□□ -1.47
CALR3Q96L12 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CALR3Q96L12 RNU6-1115P-201ENST00000362490 106 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CALR3Q96L12 MIR1203-201ENST00000408812 85 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CALR3Q96L12 RNU6-1050P-201ENST00000410388 107 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.85□□□□□ -1.47
CALR3Q96L12 RPL21P90-201ENST00000415692 466 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.85□□□□□ -1.47
CALR3Q96L12 AC113618.1-201ENST00000416747 285 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.85□□□□□ -1.47
CALR3Q96L12 AC093155.2-201ENST00000420734 937 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.85□□□□□ -1.47
CALR3Q96L12 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.85□□□□□ -1.47
CALR3Q96L12 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.85□□□□□ -1.47
CALR3Q96L12 AC096745.1-201ENST00000509945 370 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AC021146.3-201ENST00000511911 260 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 PTP4A1P4-201ENST00000512479 322 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AC026782.1-201ENST00000512952 449 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.85□□□□□ -1.47
CALR3Q96L12 RNU6-927P-201ENST00000516199 100 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 Y_RNA.720-201ENST00000517166 92 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.85□□□□□ -1.47
CALR3Q96L12 AC084121.1-201ENST00000533882 835 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.85□□□□□ -1.47
CALR3Q96L12 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.85□□□□□ -1.47
CALR3Q96L12 IGBP1P1-201ENST00000554337 1009 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 RN7SL290P-201ENST00000578661 300 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AC018462.2-201ENST00000605375 395 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AC009229.3-201ENST00000608056 282 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AC083806.3-201ENST00000614016 455 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 RN7SL544P-201ENST00000617232 284 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 RN7SL763P-201ENST00000620922 284 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 AC073869.8-201ENST00000641806 335 ntBASIC5.85□□□□□ -1.47
CALR3Q96L12 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
CALR3Q96L12 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CALR3Q96L12 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CALR3Q96L12 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CALR3Q96L12 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.85□□□□□ -1.47
CALR3Q96L12 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CALR3Q96L12 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.84□□□□□ -1.47
CALR3Q96L12 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.84□□□□□ -1.47
CALR3Q96L12 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CALR3Q96L12 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CALR3Q96L12 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CALR3Q96L12 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CALR3Q96L12 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CALR3Q96L12 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CALR3Q96L12 Y_RNA.5-201ENST00000362334 102 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms