Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RPL30P16-201ENST00000419341 429 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 NEK4P1-201ENST00000433383 879 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC091390.1-201ENST00000433904 331 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 AL662791.1-201ENST00000441992 928 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 TPT1P12-201ENST00000448968 492 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC022364.2-201ENST00000457963 554 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 RPS26P28-201ENST00000470806 348 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 STMN1P2-201ENST00000508435 439 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC093840.1-201ENST00000511599 336 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC074344.1-201ENST00000512823 224 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 HMGN1P28-201ENST00000521340 364 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 MTND1P35-201ENST00000526739 508 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 AK6P1-201ENST00000540219 478 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 BNIP3P33-201ENST00000598912 569 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AL031176.1-201ENST00000604554 466 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC007038.2-201ENST00000608095 740 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 FAM27D1-201ENST00000612308 341 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 uc_338.12-201ENST00000616344 181 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC009161.2-201ENST00000624626 138 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC008013.2-202ENST00000637965 364 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTHRC1Q96CG8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CTHRC1Q96CG8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 MTCO1P9-201ENST00000505577 1534 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTHRC1Q96CG8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CTHRC1Q96CG8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTHRC1Q96CG8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AL158163.1-201ENST00000603915 1649 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC026951.1-201ENST00000559530 2459 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RNU6-989P-201ENST00000362756 107 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RNU1-14P-201ENST00000362759 152 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RNU5A-8P-201ENST00000364102 114 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RNU6-1322P-201ENST00000364309 107 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RNU6-169P-201ENST00000365336 107 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RNU6-780P-201ENST00000391030 104 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RPL23AP48-201ENST00000406913 488 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RNU2-47P-201ENST00000410649 186 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 MTATP6P18-201ENST00000417994 673 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AL391219.1-201ENST00000422570 483 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC092832.1-201ENST00000422934 400 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 BTF3P10-201ENST00000433415 495 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 GPR143P-201ENST00000434155 205 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 MTND3P10-201ENST00000450967 341 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AL121877.1-201ENST00000453704 622 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RN7SL385P-201ENST00000468873 276 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC108145.1-201ENST00000503770 153 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RN7SKP122-201ENST00000515923 296 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 Y_RNA.704-201ENST00000516851 102 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RNA5SP337-201ENST00000517007 109 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC103783.1-201ENST00000520506 373 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 IGLV3-26-201ENST00000520756 302 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC022616.3-201ENST00000523940 148 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC011979.2-201ENST00000527568 352 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 CR383656.7-201ENST00000548164 174 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC136624.4-201ENST00000573044 370 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 MIR4697-201ENST00000582977 78 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 LLPHP1-201ENST00000603571 367 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC010680.4-201ENST00000605334 543 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC004067.1-201ENST00000608733 700 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC245517.5-201ENST00000611529 162 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms