Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 OR51B8P-201ENST00000449892 769 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 DNAJC19P8-201ENST00000452887 259 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 GTF2IP12-201ENST00000456547 356 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 AC021146.1-201ENST00000511202 716 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 AL512310.1-201ENST00000548639 172 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 TGIF1P1-201ENST00000558095 802 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 CYCSP39-201ENST00000565821 309 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 AC095057.3-201ENST00000567102 1157 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 VN1R90P-201ENST00000595717 726 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 AP002360.4-201ENST00000606980 481 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 AC007494.3-201ENST00000624660 743 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.76□□□□□ -1.81
SNED1Q8TER0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.76□□□□□ -1.81
SNED1Q8TER0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNED1Q8TER0 OR11H5P-202ENST00000641612 1325 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 AP003122.5-201ENST00000527668 3766 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC000403.1-201ENST00000613696 3585 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 U3.12-201ENST00000364498 214 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 U3.15-201ENST00000365398 212 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 RNU6-413P-201ENST00000384115 107 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 RNA5SP184-201ENST00000411071 108 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 RNA5SP31-201ENST00000411144 127 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC019178.2-201ENST00000423595 505 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 MTCYBP5-201ENST00000423752 1135 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 MTND1P32-201ENST00000433043 938 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 RPL7P59-201ENST00000447700 943 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 Z99127.3-201ENST00000448158 395 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC069528.1-202ENST00000482888 637 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 RNA5SP367-201ENST00000516557 118 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 NRON-201ENST00000517270 370 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC011602.1-201ENST00000546484 331 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC079600.2-201ENST00000550076 130 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 AGGF1P4-201ENST00000568249 801 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC083899.3-201ENST00000603413 594 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 RMST_8.1-201ENST00000610287 165 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 AL355073.2-201ENST00000612106 557 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC099842.1-201ENST00000619919 596 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC007496.3-201ENST00000624987 3443 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 AC092104.1-201ENST00000497346 1441 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNED1Q8TER0 AL136360.1-201ENST00000503377 1900 ntBASIC3.75□□□□□ -1.81
SNED1Q8TER0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 MIR124-3-201ENST00000384866 87 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 RNA5SP239-201ENST00000410218 129 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC006960.1-201ENST00000419980 153 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 C1DP1-201ENST00000426049 402 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 FO393419.3-201ENST00000428741 282 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC105402.2-201ENST00000438503 358 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AL353093.1-201ENST00000441292 436 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 AL592437.1-201ENST00000443781 492 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 SLC31A1P1-201ENST00000451221 567 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 SRRM1P2-201ENST00000464531 1192 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC012170.1-201ENST00000495139 359 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 MTATP6P22-201ENST00000507369 598 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 RNU1-143P-201ENST00000516296 146 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 NBEAP1-201ENST00000554452 979 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC087465.1-201ENST00000560574 245 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms