Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MIR1276-201ENST00000408707 83 ntBASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 MOB1AP2-201ENST00000446060 614 ntBASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 AL645939.1-201ENST00000453429 797 ntBASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 HMGB1P1-201ENST00000522557 636 ntBASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 VIS1.1-201ENST00000610517 203 ntBASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
CFAP43Q8NDM7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.05□□□□□ -1.92
CFAP43Q8NDM7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.05□□□□□ -1.92
CFAP43Q8NDM7 RPL21P2-201ENST00000440049 481 ntBASIC3.05□□□□□ -1.92
CFAP43Q8NDM7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.05□□□□□ -1.92
CFAP43Q8NDM7 AC092798.1-201ENST00000458542 409 ntBASIC3.05□□□□□ -1.92
CFAP43Q8NDM7 AC103810.1-201ENST00000579873 453 ntBASIC3.05□□□□□ -1.92
CFAP43Q8NDM7 AC034102.8-201ENST00000615146 484 ntBASIC3.05□□□□□ -1.92
CFAP43Q8NDM7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CFAP43Q8NDM7 MTND5P23-201ENST00000430812 1655 ntBASIC3.05□□□□□ -1.92
CFAP43Q8NDM7 AL353746.1-201ENST00000566293 6881 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 AL451074.3-201ENST00000437709 472 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 AC007182.2-201ENST00000489251 402 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 AC005951.1-201ENST00000576706 485 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 SNORA67.5-201ENST00000391036 107 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 SNORA26.7-201ENST00000391288 122 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 AL358453.1-201ENST00000422522 250 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 AC009237.8-201ENST00000445492 379 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 AC087190.1-201ENST00000484462 480 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 MIR4303-201ENST00000581299 66 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 RMST_2.1-201ENST00000617263 136 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 SNORA50A-202ENST00000629536 136 ntBASIC3.04□□□□□ -1.92
CFAP43Q8NDM7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 RNU6-707P-201ENST00000364647 95 ntBASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 NEK4P1-201ENST00000433383 879 ntBASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 SETP8-201ENST00000435341 628 ntBASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 HMGN1P28-201ENST00000521340 364 ntBASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 Y_RNA.783-201ENST00000613546 102 ntBASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 AC084768.2-201ENST00000622736 221 ntBASIC3.03□□□□□ -1.92
CFAP43Q8NDM7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 FNDC3CP-201ENST00000420795 1155 ntBASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 RPL23AP63-201ENST00000498752 471 ntBASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 PRELID2P1-201ENST00000552837 301 ntBASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 SNRPGP19-201ENST00000603826 189 ntBASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 AC009314.1-201ENST00000603871 304 ntBASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 AC138649.5-201ENST00000637456 137 ntBASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.02□□□□□ -1.93
CFAP43Q8NDM7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 SNORA51.11-201ENST00000384442 131 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 AC090543.1-201ENST00000492168 485 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 AL354943.1-201ENST00000572103 781 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 AC010329.2-201ENST00000595195 2737 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 RNA5SP160-201ENST00000364866 120 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 AL021407.1-201ENST00000404531 386 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 RN7SKP40-201ENST00000517211 242 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 RPS3AP4-201ENST00000555161 764 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 AC068790.3-201ENST00000602988 553 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CFAP43Q8NDM7 AL355578.1-201ENST00000607405 1328 ntBASIC3□□□□□ -1.93
CFAP43Q8NDM7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
CFAP43Q8NDM7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CFAP43Q8NDM7 MTND4P13-201ENST00000402078 1023 ntBASIC3□□□□□ -1.93
CFAP43Q8NDM7 AC019129.1-201ENST00000403786 261 ntBASIC3□□□□□ -1.93
CFAP43Q8NDM7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3□□□□□ -1.93
CFAP43Q8NDM7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3□□□□□ -1.93
CFAP43Q8NDM7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3□□□□□ -1.93
CFAP43Q8NDM7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3□□□□□ -1.93
CFAP43Q8NDM7 TVP23BP2-201ENST00000455082 615 ntBASIC3□□□□□ -1.93
CFAP43Q8NDM7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3□□□□□ -1.93
CFAP43Q8NDM7 IGHV3-76-201ENST00000522465 295 ntBASIC3□□□□□ -1.93
CFAP43Q8NDM7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3□□□□□ -1.93
CFAP43Q8NDM7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3□□□□□ -1.93
CFAP43Q8NDM7 RPS3AP23-202ENST00000574601 686 ntBASIC3□□□□□ -1.93
CFAP43Q8NDM7 PSMA6P4-201ENST00000603247 718 ntBASIC3□□□□□ -1.93
CFAP43Q8NDM7 AC012321.1-201ENST00000561622 1588 ntBASIC2.99□□□□□ -1.93
CFAP43Q8NDM7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CFAP43Q8NDM7 AL157827.1-201ENST00000447622 132 ntBASIC2.99□□□□□ -1.93
CFAP43Q8NDM7 MIR449C-201ENST00000516047 92 ntBASIC2.99□□□□□ -1.93
CFAP43Q8NDM7 MIR6504-201ENST00000613520 61 ntBASIC2.99□□□□□ -1.93
CFAP43Q8NDM7 Y_RNA.191-201ENST00000363972 113 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms