Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC89Q8N998 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC89Q8N998 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC89Q8N998 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 RNA5SP42-201ENST00000364278 115 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC89Q8N998 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 AL136116.1-201ENST00000403591 381 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 MIR320C1-201ENST00000408566 88 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 RPL7P46-201ENST00000425129 740 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 AL591419.1-201ENST00000427423 339 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 AC008850.1-201ENST00000427546 362 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 AC010099.1-201ENST00000455434 375 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 AC147055.4-201ENST00000504399 745 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 SETP2-201ENST00000553886 926 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 NUTF2P8-201ENST00000604593 363 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 AC024941.1-201ENST00000612250 334 ntBASIC3.77□□□□□ -1.81
CCDC89Q8N998 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC89Q8N998 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 DDX10P1-201ENST00000448545 1933 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 ZNF826P-207ENST00000622273 1910 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC89Q8N998 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC89Q8N998 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC89Q8N998 RNU6-462P-201ENST00000362659 105 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC89Q8N998 RNU6-114P-201ENST00000384704 105 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 MIR184-201ENST00000384962 84 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 RPL21P17-201ENST00000397467 475 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 RN7SKP285-201ENST00000410137 318 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 RNU6-628P-201ENST00000410675 107 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 RNU6-516P-201ENST00000411381 104 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 DPPA2P1-201ENST00000428060 556 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 RPL23AP14-201ENST00000468281 468 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 HMGB1P36-201ENST00000487709 576 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC104090.1-201ENST00000506341 1171 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 RNU6-579P-201ENST00000516879 102 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 MIR2116-201ENST00000517221 80 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 HIGD1AP1-201ENST00000550979 275 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC124947.2-202ENST00000552735 133 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC89Q8N998 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 MIR4700-201ENST00000578311 74 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC006116.10-201ENST00000591836 581 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC013553.2-201ENST00000604244 589 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AL158042.1-201ENST00000605338 460 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 RNU6-88P-201ENST00000606801 100 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC009974.1-201ENST00000608881 455 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AL603758.1-201ENST00000618654 241 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 AC013470.4-201ENST00000619978 986 ntBASIC3.76□□□□□ -1.81
CCDC89Q8N998 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC89Q8N998 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC89Q8N998 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC89Q8N998 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC89Q8N998 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC89Q8N998 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC89Q8N998 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC89Q8N998 AC091564.4-201ENST00000533934 2194 ntBASIC3.75□□□□□ -1.81
CCDC89Q8N998 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC89Q8N998 RNA5SP283-201ENST00000365604 119 ntBASIC3.75□□□□□ -1.81
CCDC89Q8N998 RNU6-754P-201ENST00000391166 107 ntBASIC3.75□□□□□ -1.81
CCDC89Q8N998 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC89Q8N998 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC89Q8N998 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.75□□□□□ -1.81
CCDC89Q8N998 SPA17P1-201ENST00000416656 452 ntBASIC3.75□□□□□ -1.81
CCDC89Q8N998 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC89Q8N998 AL158071.1-201ENST00000430315 461 ntBASIC3.75□□□□□ -1.81
CCDC89Q8N998 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC89Q8N998 OR4C10P-201ENST00000434991 931 ntBASIC3.75□□□□□ -1.81
CCDC89Q8N998 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms