Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 NANOGP6-201ENST00000429190 847 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 RPL21P91-201ENST00000429231 479 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 YWHAZP8-201ENST00000436935 731 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 RPL23AP20-201ENST00000447965 421 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 HMGN3P1-201ENST00000453847 193 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 RPL7P22-201ENST00000466005 733 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 LRRC34P2-201ENST00000514850 553 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 SCARNA15.1-201ENST00000516384 125 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-445P-201ENST00000516949 107 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AL359212.1-201ENST00000556608 614 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 MIR5186-201ENST00000577504 120 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AC090312.1-201ENST00000580637 348 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 MAGOH2P-202ENST00000584384 429 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AC012507.3-201ENST00000603556 477 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AC055876.5-201ENST00000605667 259 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 COX6CP4-201ENST00000605798 228 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 RMST_3.1-201ENST00000611651 109 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AC006504.8-201ENST00000621046 635 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AC091905.2-201ENST00000623143 306 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 U6.101-201ENST00000637707 76 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 MAPK10-303ENST00000641324 3959 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RNU1-83P-201ENST00000363426 164 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RNY3P3-201ENST00000363816 102 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 Y_RNA.529-201ENST00000384586 119 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RPL31P1-201ENST00000398116 372 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AL590704.1-201ENST00000402856 794 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RPS20P15-201ENST00000412792 311 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 SDCBPP3-201ENST00000419629 891 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC008850.1-201ENST00000427546 362 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 YME1L1P1-201ENST00000429435 297 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RPL23AP25-201ENST00000430973 463 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RPL23AP83-201ENST00000434984 473 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 MTND6P18-201ENST00000439477 513 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 MTCO3P2-201ENST00000457365 171 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-1153P-201ENST00000516760 105 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-201P-201ENST00000517100 61 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 SOD1P3-201ENST00000518682 454 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC022616.6-201ENST00000520479 119 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 HSPA8P13-201ENST00000523715 472 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AL162413.1-201ENST00000603198 110 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC025449.1-201ENST00000603896 529 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC007621.1-201ENST00000604544 437 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-87P-201ENST00000607561 108 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC064836.2-201ENST00000609491 462 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC135507.2-201ENST00000612443 309 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 YWHAEP7-203ENST00000622054 312 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC015908.5-201ENST00000623289 343 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 AC107081.3-201ENST00000612715 2034 ntBASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms