Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC009509.4-201ENST00000619202 509 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AL357559.1-201ENST00000622228 274 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC025048.6-202ENST00000627667 438 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 USP8P1-201ENST00000494673 3183 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 BDP1P-201ENST00000582658 1990 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC092104.1-201ENST00000497346 1441 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 SNORD82-201ENST00000365530 70 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 RNU6-356P-201ENST00000384140 107 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 RNU6-878P-201ENST00000384578 110 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 RPS7P13-201ENST00000413955 498 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC006366.1-201ENST00000422002 759 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AL139247.1-201ENST00000422768 325 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 OR51AB1P-201ENST00000429046 620 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 EZH2P1-201ENST00000431167 291 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC087650.1-201ENST00000431445 468 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC011742.1-201ENST00000431448 434 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 LSM1P1-201ENST00000438629 273 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC127537.2-201ENST00000439258 465 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 HSPE1P28-201ENST00000443139 211 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 RANP8-201ENST00000444720 713 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC002381.1-201ENST00000447049 280 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AL592447.1-201ENST00000447592 540 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC005297.2-201ENST00000450430 606 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 RNU7-170P-201ENST00000459303 61 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 FAM172BP-201ENST00000487497 1089 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 RPL7P47-201ENST00000497299 556 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 CBX3P3-201ENST00000508108 532 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 MTCO3P44-201ENST00000510977 541 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC010342.1-201ENST00000514047 877 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC022447.1-201ENST00000515358 464 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AP000873.5-201ENST00000533906 236 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AL353997.4-201ENST00000586196 166 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC083760.1-201ENST00000589621 670 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC007179.3-201ENST00000604976 235 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 BCRP9-201ENST00000605312 388 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS52Q8N1B4 AC006378.2-201ENST00000623178 2476 ntBASIC4.14□□□□□ -1.75
VPS52Q8N1B4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 RNU6-289P-201ENST00000364093 107 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 MTND4LP20-201ENST00000402379 270 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AL138880.1-201ENST00000405824 642 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 MIR320C1-201ENST00000408566 88 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 RNU2-37P-201ENST00000410695 177 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 RPS29P4-201ENST00000414733 161 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 GLRXP1-201ENST00000423261 334 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AL589823.1-201ENST00000429577 183 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 MTCO1P19-201ENST00000443487 500 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 ST13P20-201ENST00000447996 1065 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 PAXBP1P1-201ENST00000449315 447 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC110768.1-201ENST00000509222 400 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC005798.1-201ENST00000513715 387 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC007991.1-201ENST00000522680 631 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AP002963.1-201ENST00000530590 184 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 ZNF192P1-203ENST00000565888 810 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 MIR544B-201ENST00000582372 78 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC068790.2-201ENST00000602601 557 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC128687.1-201ENST00000605304 619 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC068276.1-201ENST00000605793 379 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC087752.4-201ENST00000605911 462 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC239868.4-201ENST00000608318 671 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC073968.1-201ENST00000618594 637 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC092656.1-203ENST00000624134 423 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms