Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RN7SKP256-201ENST00000517201 314 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-709P-201ENST00000517257 104 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 IGKV1-32-201ENST00000519290 311 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AL133153.1-201ENST00000557756 303 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC130324.3-201ENST00000614165 542 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 MIR6853-201ENST00000619642 74 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 MTND5P3-201ENST00000438536 1800 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC004972.1-201ENST00000623934 2209 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-1029P-201ENST00000384109 107 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-146P-201ENST00000384602 108 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 MIR192-201ENST00000384915 110 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AL606923.1-201ENST00000406616 190 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RNU2-36P-201ENST00000410361 191 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RN7SKP140-201ENST00000411196 284 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RPL31P2-201ENST00000413849 377 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AL451054.2-201ENST00000420896 202 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 FABP7P2-201ENST00000429946 379 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 NDUFA5P4-201ENST00000436704 385 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RPL35AP21-201ENST00000437667 333 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC073264.2-201ENST00000448886 166 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AL118520.1-201ENST00000450770 291 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AL162395.1-201ENST00000457882 422 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RNU7-182P-201ENST00000459009 62 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC008897.1-201ENST00000494006 347 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RN7SL558P-201ENST00000497468 299 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RN7SKP13-201ENST00000515933 244 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RNU2-10P-201ENST00000516375 211 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 Y_RNA.691-201ENST00000516611 103 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RNA5SP392-201ENST00000516905 112 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RPL7P20-201ENST00000520308 745 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 GSTP1P1-201ENST00000548078 319 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 MIR4330-201ENST00000579077 105 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC103710.3-201ENST00000608157 948 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 MIR6748-201ENST00000610433 71 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC009643.2-201ENST00000603543 1448 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC007529.1-201ENST00000418574 2178 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 AC027290.2-201ENST00000623210 18662 ntBASIC4.68□□□□□ -1.66
TRIM48Q8IWZ4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AL359893.1-201ENST00000447628 1580 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-1078P-201ENST00000364522 103 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AC013442.1-201ENST00000397347 228 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 UBE2V1P2-201ENST00000397758 440 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 RPS4XP9-201ENST00000405151 780 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AL356967.1-201ENST00000406305 431 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms