Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 RPS25P9-201ENST00000435591 252 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 HMGB3P11-201ENST00000440127 604 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 MTND2P20-201ENST00000440805 661 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 TXNP1-201ENST00000441872 371 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 MTCYBP11-201ENST00000447254 1109 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AL136097.1-201ENST00000456945 913 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC087312.1-201ENST00000471411 480 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 RPL7P18-201ENST00000478965 734 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 RPL31P13-201ENST00000484151 370 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC021146.5-201ENST00000503544 545 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 RNU5A-4P-201ENST00000516588 111 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AL139174.1-201ENST00000531489 886 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 LRRC34P1-201ENST00000542742 915 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC023050.2-201ENST00000544968 387 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC009712.1-201ENST00000564938 316 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 ZNF192P1-203ENST00000565888 810 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC107954.1-201ENST00000565906 727 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 MAGOH2P-202ENST00000584384 429 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC022146.1-201ENST00000595307 847 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC069304.2-201ENST00000605154 435 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AL160281.1-201ENST00000605307 311 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC006270.3-201ENST00000605967 1036 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC243773.3-201ENST00000613270 256 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC073968.1-201ENST00000618594 637 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC092628.2-201ENST00000622492 339 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AF117829.1-206ENST00000621883 3802 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 OR5BR1P-201ENST00000524992 1330 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 SNORA7.2-201ENST00000364446 145 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 RPL31P12-201ENST00000422587 358 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 ELOCP23-201ENST00000452014 332 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 RPL18AP17-201ENST00000455326 198 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 AC010468.1-201ENST00000461022 817 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 RPS15AP17-201ENST00000470598 390 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 RPL23AP55-201ENST00000498163 452 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 OR5H5P-201ENST00000503164 928 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 RNU6-583P-201ENST00000516012 92 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 UBL5P2-201ENST00000583788 219 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 CYP3A51P-201ENST00000633513 256 ntBASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC60Q8IWA6 MTCO1P23-201ENST00000415223 1526 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AP002907.1-201ENST00000606361 1430 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 GDI2P1-201ENST00000429312 1336 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 SNORA51.2-201ENST00000364595 132 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 RNU6-621P-201ENST00000364752 109 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 RNU6-157P-201ENST00000383957 107 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 TAS2R15P-201ENST00000390674 928 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 RPL31P1-201ENST00000398116 372 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 MTND4LP20-201ENST00000402379 270 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 MIR1284-201ENST00000408337 120 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 FNDC3CP-201ENST00000420795 1155 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 Z99127.3-201ENST00000448158 395 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 TRGVB-201ENST00000453257 471 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 ANKRD26P4-201ENST00000455755 950 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC078785.3-201ENST00000476607 425 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms