Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC021146.1-201ENST00000511202 716 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB1Q86U70 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB1Q86U70 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB1Q86U70 RN7SKP244-201ENST00000516513 307 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB1Q86U70 AC013828.2-201ENST00000532487 235 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 GTF2IP22-201ENST00000554443 182 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AC135628.1-201ENST00000568867 534 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 MIR4738-201ENST00000579134 87 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 MIR544B-201ENST00000582372 78 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB1Q86U70 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.58□□□□□ -1.84
LDB1Q86U70 AC007687.1-201ENST00000602704 304 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 MTCYBP22-201ENST00000603788 447 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AC112187.2-201ENST00000604345 283 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AC092354.2-201ENST00000607786 514 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AC103710.4-201ENST00000609301 899 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AL121772.2-201ENST00000614331 297 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AF246928.1-201ENST00000623768 87 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 AC006927.3-201ENST00000638789 384 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB1Q86U70 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LDB1Q86U70 MTND4P16-201ENST00000466108 1367 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 AC116096.1-201ENST00000566804 2314 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB1Q86U70 SNORD9-201ENST00000362566 104 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB1Q86U70 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
LDB1Q86U70 Y_RNA.560-201ENST00000384689 102 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AC002075.2-201ENST00000425207 252 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 DUTP6-201ENST00000425573 462 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB1Q86U70 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AL512649.1-201ENST00000428997 581 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AC122718.1-201ENST00000439448 744 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB1Q86U70 RPS29P31-201ENST00000446147 164 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB1Q86U70 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB1Q86U70 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB1Q86U70 RPL9P32-201ENST00000464118 620 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 FAM133DP-201ENST00000464802 691 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AC092451.1-201ENST00000480211 153 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 BET1P1-201ENST00000482276 359 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AC021382.1-201ENST00000483523 359 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AL024509.2-201ENST00000493462 493 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 MLLT10P2-201ENST00000506434 249 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AC103783.1-201ENST00000520506 373 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB1Q86U70 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB1Q86U70 MTCO1P47-201ENST00000523889 1271 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB1Q86U70 MIR3690-201ENST00000580266 75 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AC008088.1-201ENST00000580993 280 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AL109653.1-201ENST00000603091 248 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AL391497.1-201ENST00000608671 547 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AC106028.5-201ENST00000610332 395 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 MIR7844-201ENST00000616161 122 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 U4.6-201ENST00000621618 127 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AL353748.2-201ENST00000622148 471 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AL161637.1-201ENST00000622380 412 ntBASIC3.57□□□□□ -1.84
LDB1Q86U70 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB1Q86U70 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB1Q86U70 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB1Q86U70 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB1Q86U70 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB1Q86U70 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB1Q86U70 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB1Q86U70 OTUD4P1-201ENST00000237841 3067 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 CR383658.2-201ENST00000547576 1525 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB1Q86U70 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LDB1Q86U70 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LDB1Q86U70 RNU6-853P-201ENST00000364306 107 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB1Q86U70 MIR554-201ENST00000384874 96 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 MIR134-201ENST00000385258 73 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LDB1Q86U70 AL031577.2-201ENST00000404133 280 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 RNU2-37P-201ENST00000410695 177 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 RNU6-920P-201ENST00000410926 92 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 RNU2-71P-201ENST00000411395 189 ntBASIC3.56□□□□□ -1.84
LDB1Q86U70 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB1Q86U70 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms