Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 SNORD27-201ENST00000363981 72 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 Y_RNA.314-201ENST00000365114 102 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RNU6-61P-201ENST00000365528 109 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RNU6-338P-201ENST00000383888 105 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RNU6-886P-201ENST00000384319 105 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 PRRC2CP1-201ENST00000404428 159 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AL583834.1-201ENST00000406943 343 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 MIR1286-201ENST00000408112 78 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RNU6-55P-201ENST00000411092 107 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 Z99755.1-201ENST00000414048 380 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RAC1P3-201ENST00000416129 580 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RPL37P1-201ENST00000432310 284 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 UBE2V1P13-201ENST00000436983 439 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RAC1P7-201ENST00000445367 377 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 CHEK2P4-201ENST00000450340 246 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AC108059.3-201ENST00000456388 214 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 snoU13.8-201ENST00000458890 104 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 DYNLL1P5-201ENST00000467158 270 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RN7SL727P-201ENST00000482164 296 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AC021382.1-201ENST00000483523 359 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AC126177.5-201ENST00000549599 178 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 SETP2-201ENST00000553886 926 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AC040958.1-201ENST00000561102 201 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RPL10P14-201ENST00000565265 298 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AC130289.1-201ENST00000577321 73 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AC018445.2-201ENST00000622987 260 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 HSPA8P14-201ENST00000552265 1805 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 AL034549.2-201ENST00000618285 3373 ntBASIC4.8□□□□□ -1.64
ATG4DQ86TL0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4DQ86TL0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC092376.2-201ENST00000622621 4116 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC093591.2-201ENST00000565254 3843 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 Y_RNA.29-201ENST00000362570 113 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RNU6-190P-201ENST00000384154 102 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RNU6-662P-201ENST00000384253 104 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 Y_RNA.478-201ENST00000384358 107 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RNU6-1127P-201ENST00000384580 107 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC110754.1-201ENST00000399740 601 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RNU4-46P-201ENST00000410818 138 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RNU2-14P-201ENST00000411053 191 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RN7SKP126-201ENST00000411143 300 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC096664.2-201ENST00000411843 406 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 COX5BP7-201ENST00000414780 274 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RPL36P19-201ENST00000430744 301 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC105402.2-201ENST00000438503 358 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC099799.1-201ENST00000439809 192 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RPS11P7-201ENST00000442125 465 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms