Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC093908.1-201ENST00000623125 8092 ntBASIC3.29□□□□□ -1.88
NHLRC1Q6VVB1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NHLRC1Q6VVB1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.29□□□□□ -1.88
NHLRC1Q6VVB1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NHLRC1Q6VVB1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NHLRC1Q6VVB1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NHLRC1Q6VVB1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 RNU6-931P-201ENST00000363850 107 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 RNU4-28P-201ENST00000364739 141 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 RNU6-283P-201ENST00000364788 107 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 RNU6-83P-201ENST00000384568 112 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 MIR134-201ENST00000385258 73 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 RPS4XP3-201ENST00000398541 413 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC245054.1-201ENST00000420944 258 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC233728.2-201ENST00000425348 757 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 MTATP6P4-201ENST00000427725 675 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 MTCO2P20-201ENST00000437339 673 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 SETD6P1-201ENST00000444575 317 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 MTND1P31-201ENST00000449206 961 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 RNA5SP310-201ENST00000459084 116 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 RPL30P14-201ENST00000482744 348 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC106872.3-201ENST00000495104 446 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC093809.1-201ENST00000509155 340 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 MTND4LP31-201ENST00000514859 294 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 RPL12P22-201ENST00000519073 490 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 UBTFL10-201ENST00000528532 562 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC068587.4-201ENST00000533893 186 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AL354943.1-201ENST00000572103 781 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 MIR4738-201ENST00000579134 87 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AL357094.1-201ENST00000603845 844 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AL031281.1-201ENST00000604049 488 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC072039.2-201ENST00000608883 439 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC009570.1-201ENST00000609599 745 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC005344.1-201ENST00000613391 459 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC097655.1-201ENST00000635075 318 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC244258.1-201ENST00000637553 1071 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 AC103706.2-201ENST00000638080 240 ntBASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NHLRC1Q6VVB1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
NHLRC1Q6VVB1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 SNORA62.3-201ENST00000365110 153 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-744P-201ENST00000365557 107 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-637P-201ENST00000384050 107 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-253P-201ENST00000384730 105 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 RPS3AP24-201ENST00000407896 734 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 MTCO1P17-201ENST00000411522 491 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 HIGD1AP15-201ENST00000416198 280 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 Z80107.1-201ENST00000436830 412 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 SNORA84-201ENST00000459229 133 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC021146.8-201ENST00000507455 733 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms