Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.59□□□□□ -1.99
NUP188Q5SRE5 MLLT10P2-201ENST00000506434 249 ntBASIC2.59□□□□□ -1.99
NUP188Q5SRE5 HMGB1P1-201ENST00000522557 636 ntBASIC2.59□□□□□ -1.99
NUP188Q5SRE5 RPS3AP4-201ENST00000555161 764 ntBASIC2.59□□□□□ -1.99
NUP188Q5SRE5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.59□□□□□ -1.99
NUP188Q5SRE5 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.59□□□□□ -1.99
NUP188Q5SRE5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NUP188Q5SRE5 MTND5P7-201ENST00000413558 1798 ntBASIC2.59□□□□□ -1.99
NUP188Q5SRE5 AL356575.1-201ENST00000603008 283 ntBASIC2.59□□□□□ -2
NUP188Q5SRE5 PSMA6P4-201ENST00000603247 718 ntBASIC2.59□□□□□ -2
NUP188Q5SRE5 AC132825.8-201ENST00000640783 297 ntBASIC2.59□□□□□ -2
NUP188Q5SRE5 AC244517.1-201ENST00000606030 2086 ntBASIC2.58□□□□□ -2
NUP188Q5SRE5 SNORA26.7-201ENST00000391288 122 ntBASIC2.58□□□□□ -2
NUP188Q5SRE5 AC005005.2-201ENST00000420779 380 ntBASIC2.58□□□□□ -2
NUP188Q5SRE5 FAM92A1P1-201ENST00000528023 890 ntBASIC2.58□□□□□ -2
NUP188Q5SRE5 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.58□□□□□ -2
NUP188Q5SRE5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.58□□□□□ -2
NUP188Q5SRE5 C2orf27A-204ENST00000623058 969 ntBASIC2.58□□□□□ -2
NUP188Q5SRE5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.58□□□□□ -2
NUP188Q5SRE5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.58□□□□□ -2
NUP188Q5SRE5 API5P2-201ENST00000397055 1498 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NUP188Q5SRE5 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.57□□□□□ -2
NUP188Q5SRE5 ATP5F1P1-201ENST00000433775 569 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.57□□□□□ -2
NUP188Q5SRE5 SETP8-201ENST00000435341 628 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.57□□□□□ -2
NUP188Q5SRE5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.57□□□□□ -2
NUP188Q5SRE5 AC092798.1-201ENST00000458542 409 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 RNU7-95P-201ENST00000459222 64 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 GTF2IP9-201ENST00000502460 301 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.57□□□□□ -2
NUP188Q5SRE5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.57□□□□□ -2
NUP188Q5SRE5 AC087241.2-201ENST00000535801 324 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 MIR4255-201ENST00000579351 72 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.57□□□□□ -2
NUP188Q5SRE5 AC120053.1-201ENST00000607706 736 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 AC092650.2-201ENST00000619984 902 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 RPL23AP61-201ENST00000623642 466 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
NUP188Q5SRE5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NUP188Q5SRE5 RLIMP2-201ENST00000427891 1563 ntBASIC2.57□□□□□ -2
NUP188Q5SRE5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.56□□□□□ -2
NUP188Q5SRE5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUP188Q5SRE5 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.56□□□□□ -2
NUP188Q5SRE5 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.56□□□□□ -2
NUP188Q5SRE5 AC006483.1-201ENST00000487308 313 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 RPS29P11-201ENST00000496507 171 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.56□□□□□ -2
NUP188Q5SRE5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.56□□□□□ -2
NUP188Q5SRE5 ARL2BPP2-201ENST00000550907 489 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 BX248123.2-201ENST00000606318 124 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.56□□□□□ -2
NUP188Q5SRE5 AC000367.1-201ENST00000452711 1766 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
NUP188Q5SRE5 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUP188Q5SRE5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 SDR42E1P3-201ENST00000438345 502 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.56□□□□□ -2
NUP188Q5SRE5 RPL21P2-201ENST00000440049 481 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 SNRPFP2-201ENST00000440710 251 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 MOB1AP2-201ENST00000446060 614 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 HMGB3P15-201ENST00000507326 574 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.56□□□□□ -2
NUP188Q5SRE5 AP000790.1-201ENST00000528891 737 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 WISP1-OT1-201ENST00000602893 642 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 RPAP2P1-201ENST00000603626 1168 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 MIR6504-201ENST00000613520 61 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 AC084768.2-201ENST00000622736 221 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 AC004943.3-201ENST00000624116 600 ntBASIC2.56□□□□□ -2
NUP188Q5SRE5 AL355578.1-201ENST00000607405 1328 ntBASIC2.55□□□□□ -2
NUP188Q5SRE5 U3.37-201ENST00000408528 213 ntBASIC2.55□□□□□ -2
NUP188Q5SRE5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.55□□□□□ -2
NUP188Q5SRE5 RPL34P26-201ENST00000445636 354 ntBASIC2.55□□□□□ -2
NUP188Q5SRE5 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.55□□□□□ -2
NUP188Q5SRE5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.55□□□□□ -2
NUP188Q5SRE5 TVP23BP2-201ENST00000455082 615 ntBASIC2.55□□□□□ -2
NUP188Q5SRE5 AC090543.1-201ENST00000492168 485 ntBASIC2.55□□□□□ -2
NUP188Q5SRE5 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
NUP188Q5SRE5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.55□□□□□ -2
NUP188Q5SRE5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.55□□□□□ -2
NUP188Q5SRE5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.55□□□□□ -2
NUP188Q5SRE5 MAGOH2P-202ENST00000584384 429 ntBASIC2.55□□□□□ -2
NUP188Q5SRE5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.55□□□□□ -2
NUP188Q5SRE5 AC012360.2-201ENST00000609349 391 ntBASIC2.55□□□□□ -2
NUP188Q5SRE5 AL512283.1-201ENST00000606756 1384 ntBASIC2.55□□□□□ -2
NUP188Q5SRE5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
NUP188Q5SRE5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NUP188Q5SRE5 FAM35CP-201ENST00000554755 2470 ntBASIC2.54□□□□□ -2
NUP188Q5SRE5 Y_RNA.191-201ENST00000363972 113 ntBASIC2.54□□□□□ -2
NUP188Q5SRE5 SNORA67.5-201ENST00000391036 107 ntBASIC2.54□□□□□ -2
NUP188Q5SRE5 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
NUP188Q5SRE5 AF274854.1-201ENST00000413236 615 ntBASIC2.54□□□□□ -2
NUP188Q5SRE5 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.54□□□□□ -2
NUP188Q5SRE5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.54□□□□□ -2
NUP188Q5SRE5 AL358453.1-201ENST00000422522 250 ntBASIC2.54□□□□□ -2
NUP188Q5SRE5 AC089999.1-201ENST00000460336 374 ntBASIC2.54□□□□□ -2
NUP188Q5SRE5 GZMAP1-201ENST00000503054 631 ntBASIC2.54□□□□□ -2
NUP188Q5SRE5 AC117532.1-201ENST00000514638 323 ntBASIC2.54□□□□□ -2
NUP188Q5SRE5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms