Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 Y_RNA.1-201ENST00000352915 104 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 RPL7P25-201ENST00000404151 721 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 RAC1P3-201ENST00000416129 580 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 MTCYBP24-201ENST00000420387 1106 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AL109913.1-201ENST00000421173 514 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 EIF4EP1-201ENST00000422311 642 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 PSMA6P3-201ENST00000428242 164 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC002486.1-201ENST00000435098 391 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 HMGB1P31-201ENST00000437242 427 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 HLA-N-201ENST00000437516 135 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 SDCBPP1-201ENST00000440192 890 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 RPS4XP4-201ENST00000443195 763 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC007182.2-201ENST00000489251 402 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 KCTD9P5-201ENST00000504141 1170 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 RNU7-143P-201ENST00000516781 65 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 OR5AQ1P-201ENST00000527596 927 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AK6P1-201ENST00000540219 478 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC092470.1-201ENST00000546187 132 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AL845331.3-202ENST00000562856 261 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC245014.2-201ENST00000603689 287 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC246785.4-201ENST00000605374 287 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC011816.2-201ENST00000607089 556 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC104458.1-201ENST00000608243 463 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 MIR6867-201ENST00000610636 67 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 AC008725.1-201ENST00000605123 2263 ntBASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC178Q5BJE1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 RNA5SP130-201ENST00000364431 114 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 RNU1-13P-201ENST00000384499 162 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 HSPE1P12-201ENST00000412576 301 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 PIGFP2-201ENST00000421400 651 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC000111.3-201ENST00000433478 193 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC104850.1-201ENST00000435940 476 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 USP9YP15-201ENST00000442391 422 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 RPL7P52-201ENST00000449200 742 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 NUTF2P7-201ENST00000453086 375 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC010683.1-201ENST00000473673 378 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 HMGB1P29-201ENST00000505659 499 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 SAP18P1-201ENST00000512058 390 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 IGLVIV-53-201ENST00000520107 367 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 RPL23AP87-202ENST00000573039 466 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC025627.2-201ENST00000576220 160 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 LARP7P1-201ENST00000605576 316 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC004825.2-201ENST00000616634 455 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 ZYXP1-201ENST00000617638 118 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC091905.1-201ENST00000624400 311 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AC099654.14-201ENST00000638599 341 ntBASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC178Q5BJE1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 Y_RNA.402-201ENST00000383972 102 ntBASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 MIR3074-201ENST00000384885 81 ntBASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 RNU2-21P-201ENST00000410368 188 ntBASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 AL359704.1-201ENST00000411586 781 ntBASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 AC078974.1-201ENST00000411597 223 ntBASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 AC009237.5-201ENST00000414271 501 ntBASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 AC019097.1-201ENST00000424783 735 ntBASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 AL358472.1-201ENST00000431295 329 ntBASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC178Q5BJE1 RPS6P12-201ENST00000432491 726 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms