Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC024589.1-201ENST00000512207 263 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 SNORA70.24-201ENST00000517233 118 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 COX6CP8-201ENST00000522620 226 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 OR4R3P-201ENST00000525084 838 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 OR4P1P-201ENST00000530808 1136 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 ROCK1P1-201ENST00000573767 549 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 PIGPP4-201ENST00000584447 307 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 BNIP3P23-201ENST00000599655 511 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 AL590229.1-201ENST00000603497 542 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AL390208.1-201ENST00000605885 644 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC090186.1-201ENST00000605991 572 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 HMGN2P28-201ENST00000606102 262 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC106028.5-201ENST00000610332 395 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC097714.1-201ENST00000511272 1647 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP41Q3LFD5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 ZNF833P-201ENST00000424938 1494 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 TNPO1P3-201ENST00000436471 2662 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 RNU6-343P-201ENST00000364709 104 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 MIR491-201ENST00000384877 84 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 MIR483-201ENST00000385070 76 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 MT-TH-201ENST00000387441 69 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 U3.29-201ENST00000391296 212 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 RPL17P50-201ENST00000396131 546 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC007742.1-201ENST00000425789 329 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC097713.2-201ENST00000430199 356 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 MED14P1-201ENST00000430517 648 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 ELOCP26-201ENST00000436067 329 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 MUPP-201ENST00000438111 566 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 MTCO1P27-201ENST00000448269 226 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP41Q3LFD5 KATNBL1P6-201ENST00000453433 915 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 HMGB1P15-201ENST00000453854 435 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 BTF3P5-201ENST00000457252 467 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 RPL32P34-201ENST00000486380 400 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 TRBV12-2-201ENST00000489763 344 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC093809.1-201ENST00000509155 340 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC021146.1-201ENST00000511202 716 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 OR5BM1P-201ENST00000512021 366 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 RNU6-27P-201ENST00000516146 107 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 Vault.1-201ENST00000516474 102 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC106038.2-201ENST00000520706 568 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC007458.1-201ENST00000542812 373 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AP001004.1-201ENST00000582468 324 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC097468.3-201ENST00000607956 456 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 AL357080.1-201ENST00000617394 239 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AL445264.1-201ENST00000621719 171 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 AC091925.2-201ENST00000625059 256 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP41Q3LFD5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP41Q3LFD5 MAPK10-373ENST00000641983 6772 ntBASIC3.87□□□□□ -1.79
USP41Q3LFD5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
USP41Q3LFD5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP41Q3LFD5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP41Q3LFD5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP41Q3LFD5 MIR490-201ENST00000384865 128 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 RNU6-821P-201ENST00000390995 107 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 RPL21P109-201ENST00000422213 475 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 SDCBPP1-201ENST00000440192 890 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 KATNBL1P3-201ENST00000443475 909 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 RPL7P52-201ENST00000449200 742 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms