Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LSM6P2-201ENST00000552208 177 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 MIR5708-201ENST00000579723 85 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 MIR3200-201ENST00000580767 85 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 MIR4325-201ENST00000583049 90 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC073387.2-201ENST00000604797 784 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC018755.4-201ENST00000619715 454 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC022509.4-201ENST00000621404 572 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCS1Q01581 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 HMGB1P5-201ENST00000255320 642 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 ANKRD36P1-201ENST00000344424 659 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 RNA5SP258-201ENST00000362750 119 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 RNU6-989P-201ENST00000362756 107 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 RNU6-657P-201ENST00000383904 107 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 Y_RNA.578-201ENST00000390903 88 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 MTCO1P56-201ENST00000401674 224 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 MTCO3P12-201ENST00000416718 547 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 MTND4P3-201ENST00000417829 541 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AL449283.1-202ENST00000418249 604 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC093155.1-201ENST00000440164 826 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 RPL36AP33-201ENST00000450395 310 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 RPS23P3-201ENST00000470993 430 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 RNU6-276P-201ENST00000516114 96 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 RNA5SP341-201ENST00000516261 117 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 DEFB130C-202ENST00000530001 230 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 AP002404.1-201ENST00000532005 451 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC090502.2-201ENST00000549267 280 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 AL121603.1-201ENST00000553815 142 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 YWHAZP1-201ENST00000556286 722 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 SNORD84-203ENST00000584275 78 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 MAGOH2P-202ENST00000584384 429 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 AP001029.3-201ENST00000588063 596 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 XIAPP1-201ENST00000603162 600 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AL158050.2-201ENST00000605336 568 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC009237.15-201ENST00000610252 501 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC092650.2-201ENST00000619984 902 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC091953.5-201ENST00000622919 233 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC104985.3-201ENST00000623479 597 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 AL512506.2-201ENST00000624472 458 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 AC013437.2-201ENST00000639587 677 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 MFSD8-245ENST00000641743 948 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 MTND5P7-201ENST00000413558 1798 ntBASIC2.78□□□□□ -1.96
HMGCS1Q01581 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS1Q01581 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HMGCS1Q01581 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HMGCS1Q01581 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HMGCS1Q01581 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
HMGCS1Q01581 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HMGCS1Q01581 RNU6-492P-201ENST00000363035 104 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 RNU6-1066P-201ENST00000363573 105 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 SNORA9.2-201ENST00000365361 133 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 RNU6-1300P-201ENST00000391046 108 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 TMSB4XP8-201ENST00000402089 135 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 AL138885.1-201ENST00000405921 675 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 AL023807.1-201ENST00000407932 359 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.77□□□□□ -1.97
HMGCS1Q01581 TMSB4XP6-201ENST00000415187 135 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.77□□□□□ -1.97
HMGCS1Q01581 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.77□□□□□ -1.97
HMGCS1Q01581 FNDC3CP-201ENST00000420795 1155 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 TMSB4XP1-201ENST00000424567 135 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 RPS6P14-201ENST00000425165 719 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.77□□□□□ -1.97
HMGCS1Q01581 AC006548.1-201ENST00000427470 102 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 OR2B8P-201ENST00000432841 938 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 SEPT7P5-201ENST00000434048 306 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 AC140076.1-201ENST00000449897 361 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 AC079776.3-201ENST00000450665 370 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 MTCO3P2-201ENST00000457365 171 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.77□□□□□ -1.97
HMGCS1Q01581 OR5H5P-201ENST00000503164 928 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 AC010374.2-201ENST00000512933 535 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 SNORA74D-201ENST00000516404 141 ntBASIC2.77□□□□□ -1.97
HMGCS1Q01581 RN7SKP282-201ENST00000516824 299 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms