Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK3Q00526 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDK3Q00526 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CDK3Q00526 RNU6-600P-201ENST00000362524 99 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 MIR3074-201ENST00000384885 81 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 MIR607-201ENST00000385241 96 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 RNU6-920P-201ENST00000410926 92 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AL137014.1-201ENST00000420490 1226 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 RPL21P109-201ENST00000422213 475 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK3Q00526 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK3Q00526 AL138799.3-201ENST00000438968 350 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC092641.1-201ENST00000440229 772 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AP000542.1-201ENST00000448473 371 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK3Q00526 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK3Q00526 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.54□□□□□ -1.84
CDK3Q00526 snoU13.24-201ENST00000458998 104 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK3Q00526 RPL23AP55-201ENST00000498163 452 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK3Q00526 RNU6-1073P-201ENST00000517182 106 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK3Q00526 AC103843.2-201ENST00000530523 682 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AP004242.1-201ENST00000533701 349 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.54□□□□□ -1.84
CDK3Q00526 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK3Q00526 AL360157.1-201ENST00000565962 87 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC012182.1-201ENST00000570133 895 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK3Q00526 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK3Q00526 AP001004.1-201ENST00000582468 324 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 MTCYBP22-201ENST00000603788 447 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC006077.1-201ENST00000604746 343 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 MIR7851-201ENST00000610611 160 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC019176.2-201ENST00000611579 315 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AL713922.2-201ENST00000619384 716 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC012314.7-201ENST00000619693 93 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC015967.1-201ENST00000619893 476 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AP003355.3-201ENST00000623465 114 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC068057.2-201ENST00000624047 895 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC007494.3-201ENST00000624660 743 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AL392088.2-201ENST00000637607 285 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AL732372.2-225ENST00000642124 456 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC092447.10-201ENST00000620607 1652 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.54□□□□□ -1.84
CDK3Q00526 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK3Q00526 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK3Q00526 AL021368.2-201ENST00000606125 5352 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK3Q00526 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK3Q00526 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK3Q00526 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CDK3Q00526 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK3Q00526 NCAPGP1-201ENST00000505112 1814 ntBASIC3.54□□□□□ -1.84
CDK3Q00526 AC007656.2-201ENST00000624902 4547 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDK3Q00526 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDK3Q00526 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CDK3Q00526 RNU6-853P-201ENST00000364306 107 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 RNU6-1074P-201ENST00000383995 104 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 Y_RNA.548-201ENST00000384656 105 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CDK3Q00526 AL031577.2-201ENST00000404133 280 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK3Q00526 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK3Q00526 DBIP2-201ENST00000419076 262 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC099677.1-201ENST00000420575 175 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 BX119904.4-201ENST00000424402 301 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 RSU1P2-202ENST00000437884 485 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 CYCSP43-201ENST00000438233 310 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AF228730.2-201ENST00000438784 848 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK3Q00526 RPS24P6-201ENST00000452670 400 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 ZNF114P1-201ENST00000453500 292 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK3Q00526 RPS3AP43-201ENST00000479743 781 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 OR2A20P-203ENST00000498397 1268 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC022447.3-201ENST00000506865 495 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CDK3Q00526 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.53□□□□□ -1.84
CDK3Q00526 AC017037.2-201ENST00000513850 890 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 RNU2-58P-201ENST00000516403 183 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 RN7SKP83-201ENST00000516512 178 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.53□□□□□ -1.84
CDK3Q00526 AC087373.1-201ENST00000524920 491 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC018630.1-201ENST00000541376 925 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.53□□□□□ -1.84
CDK3Q00526 AC091515.1-201ENST00000548110 679 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.53□□□□□ -1.84
CDK3Q00526 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.53□□□□□ -1.84
CDK3Q00526 AC109446.2-201ENST00000567872 497 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC011260.1-201ENST00000578420 472 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 MIR544B-201ENST00000582372 78 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 SNORD84-203ENST00000584275 78 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 Z99497.2-201ENST00000603634 310 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC024220.1-201ENST00000603675 484 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC106028.5-201ENST00000610332 395 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AC244100.1-202ENST00000621554 382 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms