Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC109486.1-201ENST00000486833 374 ntBASIC2.64□□□□□ -1.99
CLTCL1P53675 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.64□□□□□ -1.99
CLTCL1P53675 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.64□□□□□ -1.99
CLTCL1P53675 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.64□□□□□ -1.99
CLTCL1P53675 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.64□□□□□ -1.99
CLTCL1P53675 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.64□□□□□ -1.99
CLTCL1P53675 AC092954.1-201ENST00000609121 445 ntBASIC2.64□□□□□ -1.99
CLTCL1P53675 AL359715.4-201ENST00000606629 1436 ntBASIC2.64□□□□□ -1.99
CLTCL1P53675 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CLTCL1P53675 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CLTCL1P53675 SET-203ENST00000372688 801 ntTSL 2 BASIC2.64□□□□□ -1.99
CLTCL1P53675 RNA5SP270-201ENST00000411361 118 ntBASIC2.64□□□□□ -1.99
CLTCL1P53675 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.64□□□□□ -1.99
CLTCL1P53675 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.64□□□□□ -1.99
CLTCL1P53675 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CLTCL1P53675 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.64□□□□□ -1.99
CLTCL1P53675 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.64□□□□□ -1.99
CLTCL1P53675 HMGB1P1-201ENST00000522557 636 ntBASIC2.64□□□□□ -1.99
CLTCL1P53675 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CLTCL1P53675 RNA5SP37-201ENST00000365420 130 ntBASIC2.63□□□□□ -1.99
CLTCL1P53675 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLTCL1P53675 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.63□□□□□ -1.99
CLTCL1P53675 MIR4303-201ENST00000581299 66 ntBASIC2.63□□□□□ -1.99
CLTCL1P53675 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.63□□□□□ -1.99
CLTCL1P53675 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLTCL1P53675 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLTCL1P53675 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLTCL1P53675 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.62□□□□□ -1.99
CLTCL1P53675 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.62□□□□□ -1.99
CLTCL1P53675 AL590664.1-201ENST00000448065 339 ntBASIC2.62□□□□□ -1.99
CLTCL1P53675 SEPT7P7-201ENST00000420492 1301 ntBASIC2.62□□□□□ -1.99
CLTCL1P53675 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLTCL1P53675 MTCO1P14-201ENST00000441695 1559 ntBASIC2.62□□□□□ -1.99
CLTCL1P53675 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLTCL1P53675 AL118496.1-201ENST00000440201 1812 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 MIR378A-201ENST00000362177 66 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 RNU6-661P-201ENST00000362409 107 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 AC019129.1-201ENST00000403786 261 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 ELOCP13-201ENST00000443934 329 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 AC093392.2-201ENST00000450682 337 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 snoU13.18-201ENST00000459483 104 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 AC079804.2-201ENST00000490376 200 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLTCL1P53675 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.61□□□□□ -1.99
CLTCL1P53675 MTND4LP22-201ENST00000508209 276 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.61□□□□□ -1.99
CLTCL1P53675 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.61□□□□□ -1.99
CLTCL1P53675 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CLTCL1P53675 AL592437.2-201ENST00000421655 2434 ntBASIC2.61□□□□□ -1.99
CLTCL1P53675 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CLTCL1P53675 RPL19P1-201ENST00000411635 428 ntBASIC2.6□□□□□ -1.99
CLTCL1P53675 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.6□□□□□ -1.99
CLTCL1P53675 AL009174.1-201ENST00000426577 416 ntBASIC2.6□□□□□ -1.99
CLTCL1P53675 SNRPGP9-201ENST00000456025 225 ntBASIC2.6□□□□□ -1.99
CLTCL1P53675 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.6□□□□□ -1.99
CLTCL1P53675 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.6□□□□□ -1.99
CLTCL1P53675 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.6□□□□□ -1.99
CLTCL1P53675 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.6□□□□□ -1.99
CLTCL1P53675 AP002967.1-201ENST00000624203 539 ntBASIC2.6□□□□□ -1.99
CLTCL1P53675 AL353729.1-201ENST00000425044 720 ntBASIC2.6□□□□□ -1.99
CLTCL1P53675 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.6□□□□□ -1.99
CLTCL1P53675 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.6□□□□□ -1.99
CLTCL1P53675 MFSD8-245ENST00000641743 948 ntBASIC2.6□□□□□ -1.99
CLTCL1P53675 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
CLTCL1P53675 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.6□□□□□ -1.99
CLTCL1P53675 RNA5SP138-201ENST00000365098 114 ntBASIC2.59□□□□□ -1.99
CLTCL1P53675 MIR489-201ENST00000384923 84 ntBASIC2.59□□□□□ -1.99
CLTCL1P53675 MIR518E-201ENST00000385252 88 ntBASIC2.59□□□□□ -1.99
CLTCL1P53675 RNU4-62P-201ENST00000410125 130 ntBASIC2.59□□□□□ -1.99
CLTCL1P53675 NDUFA5P4-201ENST00000436704 385 ntBASIC2.59□□□□□ -1.99
CLTCL1P53675 AL031659.1-201ENST00000447075 539 ntBASIC2.59□□□□□ -1.99
CLTCL1P53675 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.59□□□□□ -1.99
CLTCL1P53675 AC011352.3-201ENST00000505162 593 ntBASIC2.59□□□□□ -1.99
CLTCL1P53675 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.59□□□□□ -1.99
CLTCL1P53675 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.59□□□□□ -1.99
CLTCL1P53675 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CLTCL1P53675 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.59□□□□□ -2
CLTCL1P53675 AC004520.1-201ENST00000608362 1413 ntBASIC2.58□□□□□ -2
CLTCL1P53675 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CLTCL1P53675 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.58□□□□□ -2
CLTCL1P53675 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.58□□□□□ -2
CLTCL1P53675 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.58□□□□□ -2
CLTCL1P53675 FABP5P6-201ENST00000510588 409 ntBASIC2.58□□□□□ -2
CLTCL1P53675 CBX3P4-201ENST00000538909 354 ntBASIC2.58□□□□□ -2
CLTCL1P53675 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
CLTCL1P53675 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.58□□□□□ -2
CLTCL1P53675 AL356280.1-201ENST00000603614 379 ntBASIC2.58□□□□□ -2
CLTCL1P53675 AC010678.1-201ENST00000614118 713 ntBASIC2.58□□□□□ -2
CLTCL1P53675 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.58□□□□□ -2
CLTCL1P53675 KPNA2P1-201ENST00000458289 1591 ntBASIC2.58□□□□□ -2
CLTCL1P53675 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CLTCL1P53675 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.58□□□□□ -2
CLTCL1P53675 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
CLTCL1P53675 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLTCL1P53675 MIR591-201ENST00000385290 95 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.57□□□□□ -2
CLTCL1P53675 RPL23AP76-201ENST00000441860 458 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC090453.1-201ENST00000495560 436 ntBASIC2.57□□□□□ -2
CLTCL1P53675 RN7SKP82-201ENST00000516786 223 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC008083.2-201ENST00000546707 476 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms