Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.66□□□□□ -1.82
LIMK1P53667 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMK1P53667 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.66□□□□□ -1.82
LIMK1P53667 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIMK1P53667 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LIMK1P53667 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIMK1P53667 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
LIMK1P53667 RNU6-157P-201ENST00000383957 107 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 RNU6-712P-201ENST00000410558 100 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 RN7SKP284-201ENST00000411002 343 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 RN7SKP53-201ENST00000411337 315 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 MTCO2P5-201ENST00000422621 426 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMK1P53667 AC096638.2-201ENST00000434965 711 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 MTND4LP10-201ENST00000435146 291 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 MUPP-201ENST00000438111 566 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 AL831737.1-201ENST00000441288 271 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIMK1P53667 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.66□□□□□ -1.82
LIMK1P53667 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMK1P53667 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIMK1P53667 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMK1P53667 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIMK1P53667 RN7SL429P-201ENST00000479090 223 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 RPS3AP14-201ENST00000483907 780 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 RN7SL489P-201ENST00000486185 223 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 RN7SL327P-201ENST00000488659 223 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 RPL7P24-201ENST00000493052 752 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMK1P53667 COX7A2P2-201ENST00000505291 250 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.66□□□□□ -1.82
LIMK1P53667 AC010265.1-201ENST00000513509 211 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 SNORA3.4-201ENST00000515969 96 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 RNU6-711P-201ENST00000517255 106 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 AC022695.1-201ENST00000522089 237 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 DEFB131D-201ENST00000526803 184 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMK1P53667 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMK1P53667 DUXAP1-201ENST00000556632 463 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 AL354943.1-201ENST00000572103 781 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.66□□□□□ -1.82
LIMK1P53667 AC006504.3-201ENST00000586818 523 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.66□□□□□ -1.82
LIMK1P53667 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMK1P53667 VN1R78P-201ENST00000597393 564 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 BNIP3P38-201ENST00000601117 544 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 RN7SL853P-201ENST00000617250 223 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LIMK1P53667 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LIMK1P53667 AC079228.1-201ENST00000624774 1049 ntBASIC3.66□□□□□ -1.82
LIMK1P53667 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMK1P53667 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIMK1P53667 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LIMK1P53667 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LIMK1P53667 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMK1P53667 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIMK1P53667 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LIMK1P53667 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LIMK1P53667 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.65□□□□□ -1.82
LIMK1P53667 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LIMK1P53667 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.65□□□□□ -1.82
LIMK1P53667 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LIMK1P53667 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIMK1P53667 RNU6-28P-201ENST00000362378 107 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 SNORA4.1-201ENST00000364263 144 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMK1P53667 RNU1-101P-201ENST00000391171 127 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AL354719.1-201ENST00000406535 843 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 BX842559.1-201ENST00000419615 532 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 YPEL5P1-201ENST00000419731 367 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 MTCO2P21-201ENST00000419780 677 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 RPL21P32-201ENST00000419877 477 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 DUTP6-201ENST00000425573 462 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC005300.1-201ENST00000428401 373 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.65□□□□□ -1.83
LIMK1P53667 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.65□□□□□ -1.83
LIMK1P53667 RPL23AP35-201ENST00000451906 501 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 snoU109.4-201ENST00000458953 143 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AP001992.1-205ENST00000462248 379 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 RPL21P8-201ENST00000465083 535 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIMK1P53667 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.65□□□□□ -1.83
LIMK1P53667 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMK1P53667 AC104090.1-201ENST00000506341 1171 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.65□□□□□ -1.83
LIMK1P53667 SNORD59.2-201ENST00000516873 68 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 RNU6-1231P-201ENST00000517185 103 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.65□□□□□ -1.83
LIMK1P53667 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMK1P53667 EIF4BP1-201ENST00000554881 351 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AL391156.1-201ENST00000554965 554 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 GNRHR2P1-201ENST00000555315 631 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMK1P53667 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMK1P53667 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMK1P53667 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMK1P53667 MTATP6P24-201ENST00000576835 677 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMK1P53667 BBIP1P1-201ENST00000602999 279 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms