Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RSU1P2-202ENST00000437884 485 ntBASIC3.51□□□□□ -1.85
PDX1P52945 SNRPEP7-201ENST00000438350 220 ntBASIC3.51□□□□□ -1.85
PDX1P52945 LSM1P1-201ENST00000438629 273 ntBASIC3.51□□□□□ -1.85
PDX1P52945 CYCSP32-201ENST00000440548 321 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.51□□□□□ -1.85
PDX1P52945 Z83846.1-201ENST00000446798 265 ntBASIC3.51□□□□□ -1.85
PDX1P52945 HMGN2P21-201ENST00000447764 270 ntBASIC3.51□□□□□ -1.85
PDX1P52945 RBMY2UP-201ENST00000453474 324 ntBASIC3.51□□□□□ -1.85
PDX1P52945 ZNF114P1-201ENST00000453500 292 ntBASIC3.51□□□□□ -1.85
PDX1P52945 DNAJC19P1-201ENST00000455312 319 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.51□□□□□ -1.85
PDX1P52945 RN7SL93P-201ENST00000463035 293 ntBASIC3.51□□□□□ -1.85
PDX1P52945 RPL5P23-201ENST00000496040 868 ntBASIC3.51□□□□□ -1.85
PDX1P52945 OR2A20P-203ENST00000498397 1268 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AC093809.1-201ENST00000509155 340 ntBASIC3.51□□□□□ -1.85
PDX1P52945 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.51□□□□□ -1.85
PDX1P52945 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDX1P52945 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.51□□□□□ -1.85
PDX1P52945 RNA5SP216-201ENST00000516111 123 ntBASIC3.51□□□□□ -1.85
PDX1P52945 Vault.1-201ENST00000516474 102 ntBASIC3.51□□□□□ -1.85
PDX1P52945 Y_RNA.688-201ENST00000516565 95 ntBASIC3.51□□□□□ -1.85
PDX1P52945 OR4P1P-201ENST00000530808 1136 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AL356057.1-201ENST00000533798 831 ntBASIC3.51□□□□□ -1.85
PDX1P52945 OR6C73P-201ENST00000546432 358 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AC091515.1-201ENST00000548110 679 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.51□□□□□ -1.85
PDX1P52945 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.51□□□□□ -1.85
PDX1P52945 AC110760.3-201ENST00000598794 467 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AC004987.4-201ENST00000603383 338 ntBASIC3.51□□□□□ -1.85
PDX1P52945 RNU6-88P-201ENST00000606801 100 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AC097065.2-201ENST00000608159 533 ntBASIC3.51□□□□□ -1.85
PDX1P52945 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.51□□□□□ -1.85
PDX1P52945 AL357080.1-201ENST00000617394 239 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AC018755.4-201ENST00000619715 454 ntBASIC3.51□□□□□ -1.85
PDX1P52945 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.51□□□□□ -1.85
PDX1P52945 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.51□□□□□ -1.85
PDX1P52945 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.51□□□□□ -1.85
PDX1P52945 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDX1P52945 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.51□□□□□ -1.85
PDX1P52945 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDX1P52945 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDX1P52945 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
PDX1P52945 AC095050.2-201ENST00000510748 1458 ntBASIC3.5□□□□□ -1.85
PDX1P52945 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDX1P52945 SNORD51-201ENST00000384320 80 ntBASIC3.5□□□□□ -1.85
PDX1P52945 NDUFB4P4-201ENST00000404822 243 ntBASIC3.5□□□□□ -1.85
PDX1P52945 MIR1183-201ENST00000408856 89 ntBASIC3.5□□□□□ -1.85
PDX1P52945 RNA5SP239-201ENST00000410218 129 ntBASIC3.5□□□□□ -1.85
PDX1P52945 TOMM22P1-201ENST00000418578 312 ntBASIC3.5□□□□□ -1.85
PDX1P52945 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.5□□□□□ -1.85
PDX1P52945 RPL21P109-201ENST00000422213 475 ntBASIC3.5□□□□□ -1.85
PDX1P52945 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.5□□□□□ -1.85
PDX1P52945 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 USP9YP7-201ENST00000436723 430 ntBASIC3.5□□□□□ -1.85
PDX1P52945 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 UBE2D3P4-201ENST00000441973 436 ntBASIC3.5□□□□□ -1.85
PDX1P52945 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.5□□□□□ -1.85
PDX1P52945 USP9YP32-201ENST00000452432 430 ntBASIC3.5□□□□□ -1.85
PDX1P52945 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.5□□□□□ -1.85
PDX1P52945 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.5□□□□□ -1.85
PDX1P52945 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.5□□□□□ -1.85
PDX1P52945 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.5□□□□□ -1.85
PDX1P52945 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.5□□□□□ -1.85
PDX1P52945 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.5□□□□□ -1.85
PDX1P52945 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.5□□□□□ -1.85
PDX1P52945 AP000889.1-201ENST00000530968 660 ntBASIC3.5□□□□□ -1.85
PDX1P52945 AC008011.1-201ENST00000545989 227 ntBASIC3.5□□□□□ -1.85
PDX1P52945 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.5□□□□□ -1.85
PDX1P52945 AC005000.2-201ENST00000605468 310 ntBASIC3.5□□□□□ -1.85
PDX1P52945 AC090186.1-201ENST00000605991 572 ntBASIC3.5□□□□□ -1.85
PDX1P52945 AC107214.2-201ENST00000608204 634 ntBASIC3.5□□□□□ -1.85
PDX1P52945 AC103710.4-201ENST00000609301 899 ntBASIC3.5□□□□□ -1.85
PDX1P52945 AC106028.5-201ENST00000610332 395 ntBASIC3.5□□□□□ -1.85
PDX1P52945 AC048344.4-201ENST00000619744 527 ntBASIC3.5□□□□□ -1.85
PDX1P52945 AC091965.5-201ENST00000624785 342 ntBASIC3.5□□□□□ -1.85
PDX1P52945 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PDX1P52945 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.5□□□□□ -1.85
PDX1P52945 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
PDX1P52945 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
PDX1P52945 AC090337.1-201ENST00000579651 2074 ntBASIC3.5□□□□□ -1.85
PDX1P52945 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.5□□□□□ -1.85
PDX1P52945 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.5□□□□□ -1.85
PDX1P52945 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PDX1P52945 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PDX1P52945 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 AC007685.1-201ENST00000329806 452 ntBASIC3.49□□□□□ -1.85
PDX1P52945 RNA5SP258-201ENST00000362750 119 ntBASIC3.49□□□□□ -1.85
PDX1P52945 RNA5SP50-201ENST00000363731 107 ntBASIC3.49□□□□□ -1.85
PDX1P52945 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.49□□□□□ -1.85
PDX1P52945 AL031577.2-201ENST00000404133 280 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms