Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PRIM1P49642 RNU6-754P-201ENST00000391166 107 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AC110754.1-201ENST00000399740 601 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.05□□□□□ -1.28
PRIM1P49642 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.05□□□□□ -1.28
PRIM1P49642 AC004383.1-201ENST00000438135 289 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 Z95327.1-201ENST00000446082 482 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AL138752.1-201ENST00000452964 351 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC7.05□□□□□ -1.28
PRIM1P49642 AC117503.1-201ENST00000472241 394 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AC084198.1-201ENST00000477747 402 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 RBBP4P6-201ENST00000508098 202 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.05□□□□□ -1.28
PRIM1P49642 RN7SKP92-201ENST00000517266 244 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AC012339.2-201ENST00000523996 453 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC7.05□□□□□ -1.28
PRIM1P49642 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC7.05□□□□□ -1.28
PRIM1P49642 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC7.05□□□□□ -1.28
PRIM1P49642 PSMA6P4-201ENST00000603247 718 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC7.05□□□□□ -1.28
PRIM1P49642 AC132825.6-201ENST00000638861 357 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.05□□□□□ -1.28
PRIM1P49642 INTS6P1-201ENST00000504674 2530 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PRIM1P49642 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.05□□□□□ -1.28
PRIM1P49642 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PRIM1P49642 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
PRIM1P49642 AC144833.1-201ENST00000567953 4089 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 AC083837.1-201ENST00000565297 2994 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PRIM1P49642 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PRIM1P49642 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
PRIM1P49642 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.04□□□□□ -1.28
PRIM1P49642 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
PRIM1P49642 RNU4-42P-201ENST00000364738 142 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.04□□□□□ -1.28
PRIM1P49642 RNA5SP487-201ENST00000410186 122 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 AL031736.2-201ENST00000426573 787 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC7.04□□□□□ -1.28
PRIM1P49642 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.04□□□□□ -1.28
PRIM1P49642 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.04□□□□□ -1.28
PRIM1P49642 AC069499.1-201ENST00000489433 509 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 RN7SL346P-201ENST00000491561 294 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC7.04□□□□□ -1.28
PRIM1P49642 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC7.04□□□□□ -1.28
PRIM1P49642 GAPDHP62-201ENST00000515313 990 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 AL671862.1-201ENST00000515851 349 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC7.04□□□□□ -1.28
PRIM1P49642 AC063949.1-201ENST00000552900 865 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 AC018552.1-201ENST00000562099 811 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 AC109446.1-201ENST00000566172 220 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PRIM1P49642 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRIM1P49642 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRIM1P49642 AC140479.2-201ENST00000421567 3130 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC7.04□□□□□ -1.28
PRIM1P49642 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRIM1P49642 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRIM1P49642 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
PRIM1P49642 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
PRIM1P49642 AL353796.1-201ENST00000561542 3241 ntBASIC7.04□□□□□ -1.28
PRIM1P49642 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PRIM1P49642 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
PRIM1P49642 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 AL122126.1-201ENST00000546905 1318 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.03□□□□□ -1.28
PRIM1P49642 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.03□□□□□ -1.28
PRIM1P49642 AC004076.2-201ENST00000620532 3323 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.03□□□□□ -1.28
PRIM1P49642 AC092079.1-201ENST00000558620 1985 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 RNU6-842P-201ENST00000384269 107 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 AC013442.1-201ENST00000397347 228 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 RNU6-1156P-201ENST00000410365 100 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 GAPDHP25-201ENST00000447061 1001 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 SNRPCP3-201ENST00000474888 476 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 AP000926.1-201ENST00000479573 241 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC7.03□□□□□ -1.28
PRIM1P49642 AC105758.1-201ENST00000506038 399 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC7.03□□□□□ -1.28
PRIM1P49642 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC7.03□□□□□ -1.28
PRIM1P49642 SNORA31.6-201ENST00000516241 130 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 AC144568.1-201ENST00000520139 137 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.03□□□□□ -1.28
PRIM1P49642 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC7.03□□□□□ -1.28
PRIM1P49642 AC024940.3-201ENST00000538551 316 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC7.03□□□□□ -1.28
PRIM1P49642 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
PRIM1P49642 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7.03□□□□□ -1.28
PRIM1P49642 HMGB1P50-201ENST00000605814 607 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 AC004792.1-201ENST00000614523 137 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 SNHG22-203ENST00000617833 660 ntBASIC7.03□□□□□ -1.28
PRIM1P49642 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms