Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 ELOCP23-201ENST00000452014 332 ntBASIC2.85□□□□□ -1.95
RFX3P48380 MRPL42P4-201ENST00000453267 443 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.85□□□□□ -1.95
RFX3P48380 AC104472.2-201ENST00000469035 601 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.85□□□□□ -1.95
RFX3P48380 AC104629.1-201ENST00000494226 508 ntBASIC2.85□□□□□ -1.95
RFX3P48380 RN7SKP43-201ENST00000516173 320 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.85□□□□□ -1.95
RFX3P48380 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.85□□□□□ -1.95
RFX3P48380 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.85□□□□□ -1.95
RFX3P48380 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.85□□□□□ -1.95
RFX3P48380 AC009220.3-201ENST00000604318 586 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AC099785.1-201ENST00000605697 437 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AC092954.1-201ENST00000609121 445 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AC007275.1-201ENST00000621243 671 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AP003476.1-201ENST00000623984 516 ntBASIC2.85□□□□□ -1.95
RFX3P48380 CYP3A51P-201ENST00000633513 256 ntBASIC2.85□□□□□ -1.95
RFX3P48380 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.85□□□□□ -1.95
RFX3P48380 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.85□□□□□ -1.95
RFX3P48380 API5P2-201ENST00000397055 1498 ntBASIC2.84□□□□□ -1.95
RFX3P48380 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RFX3P48380 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.84□□□□□ -1.95
RFX3P48380 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.84□□□□□ -1.95
RFX3P48380 RNU6-1066P-201ENST00000363573 105 ntBASIC2.84□□□□□ -1.95
RFX3P48380 CD24P4-201ENST00000382840 243 ntBASIC2.84□□□□□ -1.95
RFX3P48380 MIR493-201ENST00000385254 89 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AL136372.1-201ENST00000403060 228 ntBASIC2.84□□□□□ -1.95
RFX3P48380 RNU2-15P-201ENST00000410692 191 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX3P48380 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX3P48380 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.84□□□□□ -1.95
RFX3P48380 MTCO3P1-205ENST00000422088 832 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX3P48380 AC022018.1-201ENST00000430685 241 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX3P48380 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
RFX3P48380 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.84□□□□□ -1.95
RFX3P48380 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
RFX3P48380 AC244505.3-201ENST00000454598 187 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AL359385.1-201ENST00000456509 365 ntBASIC2.84□□□□□ -1.95
RFX3P48380 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX3P48380 AC112198.4-201ENST00000515450 351 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AC009812.2-201ENST00000517657 457 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX3P48380 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.84□□□□□ -1.95
RFX3P48380 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.84□□□□□ -1.95
RFX3P48380 AC068339.2-201ENST00000534395 618 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AC008127.2-201ENST00000549925 1075 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AC044913.1-201ENST00000557200 430 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AC023825.1-201ENST00000566704 1030 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AC034268.2-201ENST00000571784 482 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.84□□□□□ -1.95
RFX3P48380 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.84□□□□□ -1.95
RFX3P48380 AC124016.2-201ENST00000610058 665 ntBASIC2.84□□□□□ -1.95
RFX3P48380 AC022509.4-201ENST00000621404 572 ntBASIC2.84□□□□□ -1.95
RFX3P48380 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.84□□□□□ -1.95
RFX3P48380 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.84□□□□□ -1.95
RFX3P48380 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
RFX3P48380 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RFX3P48380 AL161431.1-201ENST00000618966 4205 ntBASIC2.84□□□□□ -1.96
RFX3P48380 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.83□□□□□ -1.96
RFX3P48380 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.83□□□□□ -1.96
RFX3P48380 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RFX3P48380 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX3P48380 ANKRD36P1-201ENST00000344424 659 ntBASIC2.83□□□□□ -1.96
RFX3P48380 RNU6-492P-201ENST00000363035 104 ntBASIC2.83□□□□□ -1.96
RFX3P48380 RNU6-1257P-201ENST00000384625 110 ntBASIC2.83□□□□□ -1.96
RFX3P48380 RPL7P25-201ENST00000404151 721 ntBASIC2.83□□□□□ -1.96
RFX3P48380 PTP4A1P7-201ENST00000423476 514 ntBASIC2.83□□□□□ -1.96
RFX3P48380 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.83□□□□□ -1.96
RFX3P48380 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX3P48380 AL589880.1-201ENST00000448271 287 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX3P48380 AC013828.1-201ENST00000481845 158 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC006445.1-201ENST00000491925 405 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX3P48380 DYNLL1P6-201ENST00000503440 264 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX3P48380 AC008837.1-201ENST00000511513 412 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.83□□□□□ -1.96
RFX3P48380 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.83□□□□□ -1.96
RFX3P48380 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.83□□□□□ -1.96
RFX3P48380 GTF2IP8-201ENST00000560687 584 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX3P48380 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX3P48380 AC068620.3-201ENST00000602749 560 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AL022099.1-201ENST00000604551 712 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC073387.2-201ENST00000604797 784 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC091946.2-201ENST00000606105 291 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.83□□□□□ -1.96
RFX3P48380 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.83□□□□□ -1.96
RFX3P48380 AC084035.1-201ENST00000634543 607 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC087821.2-201ENST00000637086 450 ntBASIC2.83□□□□□ -1.96
RFX3P48380 AC011460.1-201ENST00000636268 1834 ntBASIC2.83□□□□□ -1.96
RFX3P48380 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
RFX3P48380 AL513185.3-201ENST00000433335 1300 ntBASIC2.83□□□□□ -1.96
RFX3P48380 OR5BR1P-201ENST00000524992 1330 ntBASIC2.83□□□□□ -1.96
RFX3P48380 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX3P48380 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
RFX3P48380 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms