Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC098824.1-201ENST00000453565 980 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC234775.1-201ENST00000454247 670 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.25□□□□□ -1.89
NKX2-1P43699 RN7SL98P-201ENST00000462271 300 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 RPL35P6-201ENST00000490024 372 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 RPL7P24-201ENST00000493052 752 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 RPL23AP55-201ENST00000498163 452 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-1P43699 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-1P43699 SNORA31.8-201ENST00000516327 108 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC025881.1-201ENST00000518851 512 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AP003033.1-201ENST00000527244 415 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NKX2-1P43699 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.25□□□□□ -1.89
NKX2-1P43699 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.25□□□□□ -1.89
NKX2-1P43699 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-1P43699 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-1P43699 BNIP3P5-201ENST00000562290 498 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC006362.1-201ENST00000567392 174 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 MIR5697-201ENST00000578045 78 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 FAM60BP-201ENST00000578364 658 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AC007448.1-201ENST00000582714 234 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 RPL12P25-202ENST00000598100 674 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC244505.7-201ENST00000599675 272 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 BRDTP1-201ENST00000605735 677 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AC104073.3-201ENST00000610942 955 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AC244258.1-201ENST00000637553 1071 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NKX2-1P43699 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-1P43699 CEP170P1-201ENST00000502249 4587 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC011460.1-201ENST00000636268 1834 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AL158163.1-201ENST00000603915 1649 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-1P43699 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
NKX2-1P43699 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NKX2-1P43699 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-1P43699 MFSD8-216ENST00000641147 4009 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-1P43699 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NKX2-1P43699 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AL672296.1-201ENST00000427780 2158 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NKX2-1P43699 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX2-1P43699 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-1P43699 RNU6-1078P-201ENST00000364522 103 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-1P43699 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-1P43699 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX2-1P43699 RNU6-398P-201ENST00000384143 109 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 Y_RNA.598-201ENST00000410480 95 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 RNU2-16P-201ENST00000410712 136 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AC109780.2-201ENST00000413467 845 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 RPL36AP36-201ENST00000418616 301 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 OR8F1P-201ENST00000425243 930 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 RPEP3-201ENST00000425462 676 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 ATP5C1P1-201ENST00000441945 895 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 FAM103A2P-201ENST00000444122 354 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 RPS17P13-201ENST00000448974 407 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 RPS4XP13-201ENST00000483219 789 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 RPS23P1-201ENST00000491662 432 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 RN7SL810P-201ENST00000493031 276 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 RNA5SP49-201ENST00000516450 115 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC013828.2-201ENST00000532487 235 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.24□□□□□ -1.89
NKX2-1P43699 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms