Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC118282.2-201ENST00000508739 374 ntBASIC3.18□□□□□ -1.9
SSR1P43307 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.18□□□□□ -1.9
SSR1P43307 RNA5SP367-201ENST00000516557 118 ntBASIC3.18□□□□□ -1.9
SSR1P43307 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR1P43307 AC004486.1-201ENST00000546846 233 ntBASIC3.18□□□□□ -1.9
SSR1P43307 CYB5AP5-201ENST00000549779 389 ntBASIC3.18□□□□□ -1.9
SSR1P43307 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR1P43307 AC090666.1-201ENST00000578241 445 ntBASIC3.18□□□□□ -1.9
SSR1P43307 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR1P43307 DUXAP3-201ENST00000603616 594 ntBASIC3.18□□□□□ -1.9
SSR1P43307 RPAP2P1-201ENST00000603626 1168 ntBASIC3.18□□□□□ -1.9
SSR1P43307 VN1R74P-201ENST00000613259 503 ntBASIC3.18□□□□□ -1.9
SSR1P43307 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.18□□□□□ -1.9
SSR1P43307 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.18□□□□□ -1.9
SSR1P43307 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSR1P43307 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SSR1P43307 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSR1P43307 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SSR1P43307 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR1P43307 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
SSR1P43307 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSR1P43307 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSR1P43307 RNU6-609P-201ENST00000365459 107 ntBASIC3.17□□□□□ -1.9
SSR1P43307 RNU6-821P-201ENST00000390995 107 ntBASIC3.17□□□□□ -1.9
SSR1P43307 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.17□□□□□ -1.9
SSR1P43307 MTCO2P31-201ENST00000402702 684 ntBASIC3.17□□□□□ -1.9
SSR1P43307 RNU2-72P-201ENST00000411175 163 ntBASIC3.17□□□□□ -1.9
SSR1P43307 AC096533.1-201ENST00000411645 353 ntBASIC3.17□□□□□ -1.9
SSR1P43307 RPS3AP25-201ENST00000411660 793 ntBASIC3.17□□□□□ -1.9
SSR1P43307 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR1P43307 AL158156.1-201ENST00000422509 473 ntBASIC3.17□□□□□ -1.9
SSR1P43307 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR1P43307 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSR1P43307 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.17□□□□□ -1.9
SSR1P43307 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.17□□□□□ -1.9
SSR1P43307 MUPP-201ENST00000438111 566 ntBASIC3.17□□□□□ -1.9
SSR1P43307 AC027673.1-201ENST00000456245 405 ntBASIC3.17□□□□□ -1.9
SSR1P43307 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR1P43307 AC034236.1-201ENST00000469891 373 ntBASIC3.17□□□□□ -1.9
SSR1P43307 RPL7P49-201ENST00000471402 708 ntBASIC3.17□□□□□ -1.9
SSR1P43307 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR1P43307 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.17□□□□□ -1.9
SSR1P43307 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.17□□□□□ -1.9
SSR1P43307 RNU6-27P-201ENST00000516146 107 ntBASIC3.17□□□□□ -1.9
SSR1P43307 RN7SKP43-201ENST00000516173 320 ntBASIC3.17□□□□□ -1.9
SSR1P43307 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR1P43307 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR1P43307 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR1P43307 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR1P43307 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR1P43307 CCDC58P3-201ENST00000590792 430 ntBASIC3.17□□□□□ -1.9
SSR1P43307 CYCSP41-201ENST00000616920 296 ntBASIC3.17□□□□□ -1.9
SSR1P43307 VN1R7P-201ENST00000619242 903 ntBASIC3.17□□□□□ -1.9
SSR1P43307 AC007318.2-201ENST00000620999 243 ntBASIC3.17□□□□□ -1.9
SSR1P43307 AC026422.1-201ENST00000623961 452 ntBASIC3.17□□□□□ -1.9
SSR1P43307 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR1P43307 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSR1P43307 AC093536.2-201ENST00000565257 1406 ntBASIC3.17□□□□□ -1.9
SSR1P43307 OR5BR1P-201ENST00000524992 1330 ntBASIC3.17□□□□□ -1.9
SSR1P43307 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSR1P43307 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSR1P43307 ZNF519P1-201ENST00000449011 1626 ntBASIC3.16□□□□□ -1.9
SSR1P43307 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.16□□□□□ -1.9
SSR1P43307 U3.29-201ENST00000391296 212 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.16□□□□□ -1.9
SSR1P43307 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.16□□□□□ -1.9
SSR1P43307 RAC1P8-201ENST00000427086 527 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AC092427.1-202ENST00000430569 476 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AL512637.2-201ENST00000431287 1256 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AC002542.1-201ENST00000440683 193 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.16□□□□□ -1.9
SSR1P43307 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.16□□□□□ -1.9
SSR1P43307 SETP11-201ENST00000473027 690 ntBASIC3.16□□□□□ -1.9
SSR1P43307 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AC096751.1-202ENST00000502691 1067 ntBASIC3.16□□□□□ -1.9
SSR1P43307 PRELID3BP6-201ENST00000503839 571 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.16□□□□□ -1.9
SSR1P43307 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.16□□□□□ -1.9
SSR1P43307 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSR1P43307 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.16□□□□□ -1.9
SSR1P43307 AC090502.2-201ENST00000549267 280 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AC023825.1-201ENST00000566704 1030 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.16□□□□□ -1.9
SSR1P43307 MIR3670-2-201ENST00000582974 65 ntBASIC3.16□□□□□ -1.9
SSR1P43307 MIR3670-1-201ENST00000584160 65 ntBASIC3.16□□□□□ -1.9
SSR1P43307 MIR3670-3-201ENST00000584855 65 ntBASIC3.16□□□□□ -1.9
SSR1P43307 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSR1P43307 MIR3670-4-201ENST00000612260 65 ntBASIC3.16□□□□□ -1.9
SSR1P43307 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.16□□□□□ -1.9
SSR1P43307 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.16□□□□□ -1.9
SSR1P43307 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSR1P43307 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.15□□□□□ -1.9
SSR1P43307 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSR1P43307 RN7SKP27-201ENST00000410684 333 ntBASIC3.15□□□□□ -1.91
SSR1P43307 RPL7P37-201ENST00000425095 738 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
SSR1P43307 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SSR1P43307 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.15□□□□□ -1.91
SSR1P43307 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.15□□□□□ -1.91
SSR1P43307 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms