Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFSF9P41273 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFSF9P41273 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TNFSF9P41273 AC004944.1-201ENST00000517807 3059 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TNFSF9P41273 AC108206.1-201ENST00000570186 4159 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TNFSF9P41273 ZNF849P-201ENST00000594711 1566 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
TNFSF9P41273 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFSF9P41273 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TNFSF9P41273 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TNFSF9P41273 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TNFSF9P41273 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFSF9P41273 MRPL50P2-201ENST00000416821 482 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
TNFSF9P41273 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFSF9P41273 RPL23AP16-201ENST00000441715 421 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AC017099.1-201ENST00000448261 1028 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 RPL23AP31-201ENST00000456160 467 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 PABPC1P3-201ENST00000469174 459 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AC015908.1-201ENST00000478739 476 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFSF9P41273 AC048346.1-201ENST00000510247 144 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AC105914.1-201ENST00000511798 226 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFSF9P41273 MTND2P31-201ENST00000512602 616 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 RNA5SP380-201ENST00000517190 98 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AC022690.1-201ENST00000526681 550 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.88□□□□□ -1.95
TNFSF9P41273 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFSF9P41273 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFSF9P41273 MIR4789-201ENST00000577469 82 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 SNORD84-203ENST00000584275 78 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AC026741.1-201ENST00000605892 482 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AC107294.1-201ENST00000609524 467 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 VIS1.1-201ENST00000610517 203 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 MIR8084-201ENST00000614105 89 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AL355810.1-201ENST00000614629 552 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFSF9P41273 AC009318.4-201ENST00000620496 486 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AL360181.4-201ENST00000621752 134 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 IGHVIII-44-202ENST00000636235 289 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AC091948.2-201ENST00000636510 279 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFSF9P41273 AC002546.1-201ENST00000588041 2504 ntBASIC2.88□□□□□ -1.95
TNFSF9P41273 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TNFSF9P41273 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFSF9P41273 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TNFSF9P41273 RNU6-619P-201ENST00000365146 108 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TNFSF9P41273 MIR196B-201ENST00000384852 84 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 RPS4XP8-201ENST00000402039 771 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFSF9P41273 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFSF9P41273 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TNFSF9P41273 AC019070.1-201ENST00000415008 1024 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFSF9P41273 BX664727.1-201ENST00000416024 466 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFSF9P41273 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFSF9P41273 AL139413.1-201ENST00000421309 217 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 UBE2D3P2-201ENST00000424409 445 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 DEFB130D-201ENST00000426866 237 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AC009969.1-201ENST00000438726 172 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFSF9P41273 MRPL50P4-201ENST00000446432 475 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 OR51B8P-201ENST00000449892 769 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFSF9P41273 MTCO3P2-201ENST00000457365 171 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFSF9P41273 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFSF9P41273 GAPDHP39-201ENST00000481866 979 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 VPS26AP1-201ENST00000483197 979 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AC096751.1-202ENST00000502691 1067 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AC093767.1-201ENST00000504523 156 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFSF9P41273 KLHL2P1-201ENST00000508691 521 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TNFSF9P41273 IGHV3-76-201ENST00000522465 295 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFSF9P41273 OR4T1P-201ENST00000554933 911 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFSF9P41273 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFSF9P41273 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFSF9P41273 AL133393.1-201ENST00000603277 287 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 RPL23AP92-201ENST00000603609 255 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AC107871.2-201ENST00000612894 502 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 CR381653.2-201ENST00000624041 768 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AL121594.5-201ENST00000631724 573 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 AC005183.1-201ENST00000603687 1979 ntBASIC2.87□□□□□ -1.95
TNFSF9P41273 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFSF9P41273 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFSF9P41273 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFSF9P41273 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFSF9P41273 SNORA51.4-201ENST00000364993 124 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFSF9P41273 TMSB4XP8-201ENST00000402089 135 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 MTCO2P31-201ENST00000402702 684 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms