Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC4P35249 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.41□□□□□ -1.86
RFC4P35249 AC095057.3-201ENST00000567102 1157 ntBASIC3.41□□□□□ -1.86
RFC4P35249 AC005951.1-201ENST00000576706 485 ntBASIC3.41□□□□□ -1.86
RFC4P35249 MIR4769-201ENST00000584126 77 ntBASIC3.41□□□□□ -1.86
RFC4P35249 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
RFC4P35249 VN1R78P-201ENST00000597393 564 ntBASIC3.41□□□□□ -1.86
RFC4P35249 AC011492.1-201ENST00000600023 315 ntBASIC3.41□□□□□ -1.86
RFC4P35249 AC073387.2-201ENST00000604797 784 ntBASIC3.41□□□□□ -1.86
RFC4P35249 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.41□□□□□ -1.86
RFC4P35249 CTSLP2-204ENST00000629029 392 ntBASIC3.41□□□□□ -1.86
RFC4P35249 MTCO1P4-201ENST00000520516 1409 ntBASIC3.41□□□□□ -1.86
RFC4P35249 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
RFC4P35249 AP000526.1-201ENST00000603308 1388 ntBASIC3.4□□□□□ -1.86
RFC4P35249 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFC4P35249 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFC4P35249 U3.6-201ENST00000363622 211 ntBASIC3.4□□□□□ -1.87
RFC4P35249 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFC4P35249 RNU6-1226P-201ENST00000384317 107 ntBASIC3.4□□□□□ -1.87
RFC4P35249 SNORA46-201ENST00000384762 135 ntBASIC3.4□□□□□ -1.87
RFC4P35249 MIR525-201ENST00000384978 85 ntBASIC3.4□□□□□ -1.87
RFC4P35249 SNORD65C-201ENST00000390962 71 ntBASIC3.4□□□□□ -1.87
RFC4P35249 SNORA40.4-201ENST00000390971 128 ntBASIC3.4□□□□□ -1.87
RFC4P35249 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
RFC4P35249 AC246680.2-201ENST00000422106 389 ntBASIC3.4□□□□□ -1.87
RFC4P35249 AC096632.1-201ENST00000427395 310 ntBASIC3.4□□□□□ -1.87
RFC4P35249 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.4□□□□□ -1.87
RFC4P35249 B3GNT2P1-201ENST00000434960 952 ntBASIC3.4□□□□□ -1.87
RFC4P35249 HSPE1P28-201ENST00000443139 211 ntBASIC3.4□□□□□ -1.87
RFC4P35249 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.4□□□□□ -1.87
RFC4P35249 AC010301.1-201ENST00000473936 355 ntBASIC3.4□□□□□ -1.87
RFC4P35249 AC015724.1-201ENST00000478577 156 ntBASIC3.4□□□□□ -1.87
RFC4P35249 AC109329.2-201ENST00000519658 482 ntBASIC3.4□□□□□ -1.87
RFC4P35249 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.4□□□□□ -1.87
RFC4P35249 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.4□□□□□ -1.87
RFC4P35249 AC093510.2-201ENST00000562820 896 ntBASIC3.4□□□□□ -1.87
RFC4P35249 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.4□□□□□ -1.87
RFC4P35249 AC023824.3-201ENST00000569003 562 ntBASIC3.4□□□□□ -1.87
RFC4P35249 BNIP3P4-201ENST00000604946 565 ntBASIC3.4□□□□□ -1.87
RFC4P35249 AC008277.2-201ENST00000605196 797 ntBASIC3.4□□□□□ -1.87
RFC4P35249 AC021851.1-201ENST00000608537 1082 ntBASIC3.4□□□□□ -1.87
RFC4P35249 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RFC4P35249 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.87
RFC4P35249 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.4□□□□□ -1.87
RFC4P35249 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
RFC4P35249 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFC4P35249 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFC4P35249 RNU6-805P-201ENST00000365643 106 ntBASIC3.39□□□□□ -1.87
RFC4P35249 RNU6-444P-201ENST00000383988 108 ntBASIC3.39□□□□□ -1.87
RFC4P35249 SNORA36C-201ENST00000384289 132 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AL513477.1-202ENST00000417061 214 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AC114973.1-201ENST00000429057 632 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AC112220.1-201ENST00000434628 355 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.39□□□□□ -1.87
RFC4P35249 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC4P35249 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC4P35249 AC125238.1-201ENST00000448842 249 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC4P35249 RPL36AP33-201ENST00000450395 310 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC4P35249 RPL7P5-201ENST00000471472 736 ntBASIC3.39□□□□□ -1.87
RFC4P35249 RPS4XP6-201ENST00000477670 797 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AC105914.1-201ENST00000511798 226 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC4P35249 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.39□□□□□ -1.87
RFC4P35249 MTCO3P24-201ENST00000572729 782 ntBASIC3.39□□□□□ -1.87
RFC4P35249 SNORD84-203ENST00000584275 78 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AC128687.1-201ENST00000605304 619 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AC008962.1-201ENST00000605729 304 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AC106730.3-201ENST00000624568 641 ntBASIC3.39□□□□□ -1.87
RFC4P35249 AL356118.1-201ENST00000635272 1078 ntBASIC3.39□□□□□ -1.87
RFC4P35249 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFC4P35249 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
RFC4P35249 AL355596.1-201ENST00000565399 3996 ntBASIC3.38□□□□□ -1.87
RFC4P35249 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC4P35249 MIR26A1-201ENST00000362205 77 ntBASIC3.38□□□□□ -1.87
RFC4P35249 MIR592-201ENST00000384959 97 ntBASIC3.38□□□□□ -1.87
RFC4P35249 YPEL5P1-201ENST00000419731 367 ntBASIC3.38□□□□□ -1.87
RFC4P35249 HSPE1P1-201ENST00000421494 318 ntBASIC3.38□□□□□ -1.87
RFC4P35249 DEFB130D-201ENST00000426866 237 ntBASIC3.38□□□□□ -1.87
RFC4P35249 FO393414.1-201ENST00000428697 1184 ntBASIC3.38□□□□□ -1.87
RFC4P35249 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC4P35249 AL158053.1-201ENST00000441503 453 ntBASIC3.38□□□□□ -1.87
RFC4P35249 RAB11AP1-201ENST00000442978 646 ntBASIC3.38□□□□□ -1.87
RFC4P35249 AL929288.2-201ENST00000446368 407 ntBASIC3.38□□□□□ -1.87
RFC4P35249 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC4P35249 AC093392.2-201ENST00000450682 337 ntBASIC3.38□□□□□ -1.87
RFC4P35249 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFC4P35249 AC090525.1-201ENST00000479116 478 ntBASIC3.38□□□□□ -1.87
RFC4P35249 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.38□□□□□ -1.87
RFC4P35249 RPS27P23-201ENST00000487608 251 ntBASIC3.38□□□□□ -1.87
RFC4P35249 OR4A45P-201ENST00000529954 901 ntBASIC3.38□□□□□ -1.87
RFC4P35249 AL391156.1-201ENST00000554965 554 ntBASIC3.38□□□□□ -1.87
RFC4P35249 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
RFC4P35249 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC4P35249 AC022069.1-201ENST00000582910 658 ntBASIC3.38□□□□□ -1.87
RFC4P35249 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC4P35249 AP005229.2-201ENST00000609980 697 ntBASIC3.38□□□□□ -1.87
RFC4P35249 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.38□□□□□ -1.87
RFC4P35249 AL110115.1-201ENST00000614396 364 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms