Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RPA3P35244 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.61□□□□□ -1.99
RPA3P35244 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.61□□□□□ -1.99
RPA3P35244 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.61□□□□□ -1.99
RPA3P35244 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.61□□□□□ -1.99
RPA3P35244 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.61□□□□□ -1.99
RPA3P35244 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.61□□□□□ -1.99
RPA3P35244 RPS26P21-201ENST00000475397 348 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC126182.1-201ENST00000478134 357 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC096576.1-201ENST00000489014 359 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.61□□□□□ -1.99
RPA3P35244 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.61□□□□□ -1.99
RPA3P35244 MTND5P4-201ENST00000514978 288 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.61□□□□□ -1.99
RPA3P35244 OSBPL9P3-201ENST00000534523 595 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.61□□□□□ -1.99
RPA3P35244 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.61□□□□□ -1.99
RPA3P35244 AC079600.2-201ENST00000550076 130 ntBASIC2.61□□□□□ -1.99
RPA3P35244 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.61□□□□□ -1.99
RPA3P35244 AL391156.1-201ENST00000554965 554 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC023824.3-201ENST00000569003 562 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.61□□□□□ -1.99
RPA3P35244 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.61□□□□□ -1.99
RPA3P35244 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.61□□□□□ -1.99
RPA3P35244 AC012669.1-201ENST00000603209 283 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC106900.2-201ENST00000604994 317 ntBASIC2.61□□□□□ -1.99
RPA3P35244 ATP1B3P1-201ENST00000605365 821 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC009570.1-201ENST00000609599 745 ntBASIC2.61□□□□□ -1.99
RPA3P35244 AC131902.3-201ENST00000611767 581 ntBASIC2.61□□□□□ -1.99
RPA3P35244 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.61□□□□□ -1.99
RPA3P35244 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
RPA3P35244 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RPA3P35244 TAB3P1-202ENST00000452645 1634 ntBASIC2.6□□□□□ -1.99
RPA3P35244 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
RPA3P35244 AC103988.1-201ENST00000566382 2177 ntBASIC2.6□□□□□ -1.99
RPA3P35244 MIR9-1-201ENST00000385198 89 ntBASIC2.6□□□□□ -1.99
RPA3P35244 USP9YP20-201ENST00000419224 558 ntBASIC2.6□□□□□ -1.99
RPA3P35244 RPL21P32-201ENST00000419877 477 ntBASIC2.6□□□□□ -1.99
RPA3P35244 AL606495.1-201ENST00000422100 813 ntBASIC2.6□□□□□ -1.99
RPA3P35244 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.6□□□□□ -1.99
RPA3P35244 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.6□□□□□ -1.99
RPA3P35244 AC011816.1-201ENST00000441346 546 ntBASIC2.6□□□□□ -1.99
RPA3P35244 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.6□□□□□ -1.99
RPA3P35244 AC011352.3-201ENST00000505162 593 ntBASIC2.6□□□□□ -1.99
RPA3P35244 MLLT10P2-201ENST00000506434 249 ntBASIC2.6□□□□□ -1.99
RPA3P35244 KLHL2P1-201ENST00000508691 521 ntBASIC2.6□□□□□ -1.99
RPA3P35244 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.6□□□□□ -1.99
RPA3P35244 CKS1BP7-201ENST00000522230 235 ntBASIC2.6□□□□□ -1.99
RPA3P35244 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RPA3P35244 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.6□□□□□ -1.99
RPA3P35244 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.6□□□□□ -1.99
RPA3P35244 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.6□□□□□ -1.99
RPA3P35244 SNORD39.3-201ENST00000584451 71 ntBASIC2.6□□□□□ -1.99
RPA3P35244 AC011471.1-201ENST00000585766 187 ntBASIC2.6□□□□□ -1.99
RPA3P35244 TPMTP1-201ENST00000592307 737 ntBASIC2.6□□□□□ -1.99
RPA3P35244 VN1R90P-201ENST00000595717 726 ntBASIC2.6□□□□□ -1.99
RPA3P35244 AC009220.3-201ENST00000604318 586 ntBASIC2.6□□□□□ -1.99
RPA3P35244 AC106791.2-201ENST00000604680 391 ntBASIC2.6□□□□□ -1.99
RPA3P35244 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.6□□□□□ -1.99
RPA3P35244 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.6□□□□□ -1.99
RPA3P35244 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPA3P35244 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPA3P35244 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
RPA3P35244 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RPA3P35244 AL360182.1-201ENST00000397433 468 ntBASIC2.59□□□□□ -1.99
RPA3P35244 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RPA3P35244 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.59□□□□□ -1.99
RPA3P35244 AC092447.6-201ENST00000414578 210 ntBASIC2.59□□□□□ -1.99
RPA3P35244 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
RPA3P35244 AC091390.3-201ENST00000426478 338 ntBASIC2.59□□□□□ -1.99
RPA3P35244 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.59□□□□□ -1.99
RPA3P35244 MTCYBP34-201ENST00000439552 670 ntBASIC2.59□□□□□ -1.99
RPA3P35244 RNFT1P2-201ENST00000443064 757 ntBASIC2.59□□□□□ -1.99
RPA3P35244 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RPA3P35244 VN1R104P-201ENST00000505115 1009 ntBASIC2.59□□□□□ -1.99
RPA3P35244 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RPA3P35244 CBX3P3-201ENST00000508108 532 ntBASIC2.59□□□□□ -1.99
RPA3P35244 RN7SKP132-201ENST00000516001 208 ntBASIC2.59□□□□□ -1.99
RPA3P35244 RNA5SP282-201ENST00000516355 108 ntBASIC2.59□□□□□ -1.99
RPA3P35244 SNORA48.9-201ENST00000516419 162 ntBASIC2.59□□□□□ -1.99
RPA3P35244 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.59□□□□□ -1.99
RPA3P35244 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RPA3P35244 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.59□□□□□ -1.99
RPA3P35244 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.59□□□□□ -1.99
RPA3P35244 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.59□□□□□ -1.99
RPA3P35244 AC106782.4-201ENST00000568264 210 ntBASIC2.59□□□□□ -1.99
RPA3P35244 AC106734.1-201ENST00000568646 663 ntBASIC2.59□□□□□ -1.99
RPA3P35244 FAM60BP-201ENST00000578364 658 ntBASIC2.59□□□□□ -1.99
RPA3P35244 MIR5092-201ENST00000583139 88 ntBASIC2.59□□□□□ -1.99
RPA3P35244 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.59□□□□□ -1.99
RPA3P35244 AL033523.1-201ENST00000605153 153 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms